Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2468 ATGAAGATAAATTCTCCCCTTCTAGCTTGTTTGGCAATGTTTTGTTTCCTTGGGGTTTGTCAAGGAGGCAGCCTCAGGAAACAATTCTACAGGAAATCATGTTCTCAAGCAGAGCAGATTGTTAAGACCACAATCCAGCAACATGTCTCTTCAAGGCCTGAACTGCCAGCAAAGTTGCTTAGAATGCATTTCCATGATTGTTTTGTCAGGGGTTGTGATGGTTCGGTTCTGCTGAACTCCACTGCCGGTAACACTGCAGAGAAGGATGCCATTCCTAATTTGTCTTTGTCTGGTTTTGATGTCATAGATGAGATAAAAGAAGCATTGGAGGCAAAGTGTCCCAAAATTGTATCTTGTGCTGACATACTGGCATTGGCAGCCAGAGATGCTGTTTCTGTTCAATTTAATAATGAGCCCAAGTGGGAAGTTCTAACCGGCAGAAGAGATGGCACAGTATCCAAAAGTAGTGAAGTCCTGACCAATATCCCAGCACCTTTCTTCACCTTCACACAGCTCAAACAAAGCTTTGAAAGCAAAAGGCTTACTCTGCACGACATGGTTGTACTATCAGGAGGACACACAATTGGAGTAGGTCATTGCAACTTGTTCAGCAACAGGCTTTACAACTTCACTGGAAAAGGAGATCAAGATCCTTCTTTGAATCCCACTTATGCTGAGTTCTTAAAGACCAAGTGCAAAAGCCTCAGTGACACCACCACAACAGTAGACATGGATCCTAATAGTGGTACCACATTTGACAGTAACTACTACTCCATCCTTCTCCAGAACAAGGGTATGTTCCAATCAGACGCTGCACTTCTAGCAACCAAGCAGTCGAAAAAAATTGTTAATGAATTGGTTGGGCAAAACAAATTCTTCACAGAGTTTGGCCAGTCAATGAAGAGGATGGGAGCCATTGAGGTCCTCTCAGGCACGGCTGGGGAAATTAGGACAAAGTGCTCTGTTGTCAACTCTTAA 978 0.4356 MKINSPLLACLAMFCFLGVCQGGSLRKQFYRKSCSQAEQIVKTTIQQHVSSRPELPAKLLRMHFHDCFVRGCDGSVLLNSTAGNTAEKDAIPNLSLSGFDVIDEIKEALEAKCPKIVSCADILALAARDAVSVQFNNEPKWEVLTGRRDGTVSKSSEVLTNIPAPFFTFTQLKQSFESKRLTLHDMVVLSGGHTIGVGHCNLFSNRLYNFTGKGDQDPSLNPTYAEFLKTKCKSLSDTTTTVDMDPNSGTTFDSNYYSILLQNKGMFQSDAALLATKQSKKIVNELVGQNKFFTEFGQSMKRMGAIEVLSGTAGEIRTKCSVVNS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2468 325 Gene3D Peroxidase, domain 2 163 303 - -
Lja2g2468 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Lja2g2468 325 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PANTHER PEROXIDASE 25-RELATED 8 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PANTHER PEROXIDASE 8 323 - -
Lja2g2468 325 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 CDD secretory_peroxidase 25 323 IPR033905 GO:0004601|GO:0042744
Lja2g2468 325 Gene3D - 28 324 - -
Lja2g2468 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja2g2468 325 Pfam Peroxidase 41 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2468 Lja-Chr2 31230238 31232079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2468 25 325 Peroxidase AT1G05260 54.605 5.95e-118 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2468 K00430 - gmx:100775970 539.265