Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2454 ATGATGGCGAAGAACAATTGGGGTATGTTTGGATTCTGGGTCTGCGTCCTCTCCTTCTTGATCTGCGCCGGCGTTGGTTCTCCGGCCAGATCCGACAAGGAAACCCGTGAGAGATTCTACGGCGTTATGGTGAATTCCACTGCGCCTGAATCCAATGACACCTTCGCTAAGATGTTCGATCGCGTTCTCGAGAAGGAGTTTTCAGAAAATGACCAGCCTGAAGGATCCGATAAAAGCAGCTTCAATAGCAGTGTAGCTGATCAGCAGGCTACATTGGAGACTGTAGCTAAAATTACTCATGACAAAGCAAAGAGAAATGATACGCATGAGGGAAATAGCACAAAGTCGTTTCAGTTTCAAGATGTGTTCTCCCTGGAAAATGAAGATTCTGATGATGTGACAACTTTGATTGACAGCAAGGACAATGTCTTTGTGATGTCAAACAAGAAATCCAAATATCCTGTGCTTCAAGTGGATTTAAGGCTAATATCAGATTTAGTGGTCGTCATAGTTTCTGCAGCCATTGGTGGAATCGTCTTTTCCTGTTTGGGGCAACCGGTTATTGTGGGCTATCTTCTTGCAGGCTCCCTTATTGGACCAGGGGGTTTGAAATTCATCAGTGAAATGGTACAGGTTGAGACTGTTGCACAATTTGGAGTTGTATTTCTTCTCTTTGCTTTAGGGCTGGAGTTTTCCTTGTCGAAGTTAAAAGCTGTGGGGCCTGTTGCTGTTCTTGGAGGTCTGCTTCAAATTTTATTATTCATGTTTCTTTGTGGCATTCTTTCCATGTTATTTGGAGCCAAGTTATCTGAGGGTGTTTTTGTTGGTTCATTTCTGTCAATGTCATCAACAGCAGTGGTGATAAAGTTTTTGGTGGAGCGGAATAGTAATAATGCTCTTCATGTTCAAGTGACTATTGGGACTCTTATTTTTCAGGATTGTGCTGTGGGTTTACTATTTGCTTTGCTTCCAGTTTTGGGTGGTAACAGTGGTCTTTTACAAGGAATTGTTTCAATGGGAAAACTGTTGCTAGTGTTGTCGTTGTATCTCACTGCTACATCTATATTGTCTTGGTCGTTTGTTCCTCGCTTTCTCAAATTGATGATGCGGCTCTCATCTCAGACAAATGAGCTTTATCAGCTAGCTGCCGTTGCTTTCTGCTTGTTATCTGCGTGGTGCAGTGATAAGCTTGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGGTTTCTACAACAGACTTTGCTCAACATACTCTGGACCAGGTGGAACCAATTCGTAACCTGTTTGCAGCTCTCTTCCTCTCGAGTATTGGTATGCTTATACATGTCCACTTCCTTTGGAACCATGTGGATATCTTGCTGGCAGCTGTTATTCTGGTTATAGTTGTTAAGACTACTGTTGCTACTATAGTTACAAAGGCCTTTGGGTACAGCATTAAGACAGCACTTATTGTTGGTATCTCACTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCCTGAGTCGCGCTTCAAATCTTCATCTTGTTGAGGGGAAGATGTATCTTCTTCTTCTGGGAACAACGGCTCTTAGTCTGGTTACAACGCCGCTTTTGTTTAAATTGATACCTGCTTTCATGAATCTGGGTGTTCTCATGCACTGGTTCCCCGCTGAAAGTAGTACACCAAATGAGGGGAAAGCTTTGATGATCGAGGCAAGCAGAATATTGTGA 1719 0.4287 MMAKNNWGMFGFWVCVLSFLICAGVGSPARSDKETRERFYGVMVNSTAPESNDTFAKMFDRVLEKEFSENDQPEGSDKSSFNSSVADQQATLETVAKITHDKAKRNDTHEGNSTKSFQFQDVFSLENEDSDDVTTLIDSKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLSKLKAVGPVAVLGGLLQILLFMFLCGILSMLFGAKLSEGVFVGSFLSMSSTAVVIKFLVERNSNNALHVQVTIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIVSMGKLLLVLSLYLTATSILSWSFVPRFLKLMMRLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMVSTTDFAQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLAAVILVIVVKTTVATIVTKAFGYSIKTALIVGISLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAFMNLGVLMHWFPAESSTPNEGKALMIEASRIL* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2454 572 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 33 563 IPR045158 GO:0015386|GO:0071805|GO:1902600
Lja2g2454 572 PANTHER K(+) EFFLUX ANTIPORTER 6 33 563 - -
Lja2g2454 572 Pfam Sodium/hydrogen exchanger family 167 536 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja2g2454 572 Gene3D - 160 543 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2454 Lja-Chr2 30899246 30910629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2454 29 567 Antiporters AT5G51710 82.407 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2454 - - aprc:113868186 953.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2454 2 30899246 30910629 Lja2g2454 2 30899246 30910629 ECH