Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2440 ATGAAATTCTCATATTCTCCTTATGATCCTATAACTGCAACTGCAACACTTGGAGCTATAGCTCTAATATTCTTTGTGATAAGAACCCATTTCAAAAGGTTCAATCGAAGCAGCAAAGAAAAGCGCCATGTGGTTGCTGGGACTATCCTACATCAGTTGTTCAACTTCCACAGGATGCACGATTACATGACAGATCTCGCCAGAAAGCACAAGACTTACCGGTTGCTTAACTTTCCCATGTGTGAGGTTTACACTGCAGACCCCGCCATCGTTGAATATATCCTCAAAACAAACTTTGCAAACTATGGGAAGGGGTGGTACCACTATGGGATATTAACAGATCTTTTGGGGGATGGAATATTTACAGTGGACGGAGAGAAATGGCAACATCAAAGGAAAGTGTCTAGCTATGAAATCGCCACAAAAACAGTGAAAGATTTTAGCCTTCAAGTGTTTAAATCCAATGCAGCAAAACTTGCACGAGTTGTTTCAAAAGCTACCATATCAAATGAAACACTTGACTTCAAAGAGTTGTTCATGAAATCGACTCTAGATTCAGTGTTTAAGGTTATCCTTGGCGTAGACTTGGACACCATTTCTGGAACAAACAAAGAAGGAACCAAATTCTCCAATGCATTTGATGAAGCAAGTGCCATTACCTTGTATCGTTATGTTGATATTTTCTGGAGAATAAAGCGGTTCCTCAACATTGGAACAGAAGCAGCACTGAGGAACCATATTAAAGTGGTGGATGAATTTGTTTATAAAATCATCAAAAGCAAGATAGAGCAAGTCCAAAACTTACCACATAATTTGCCAATGAGAAGAGAAGACATGGTCTCAAGGTTTATGGCATCCAAAGAAACAGATCCAAGTTATCTTAGAGACATTATCCTCAACTTCATGATTGCAGGAAGAGATACAACAGCTGCTACTCTTTCTTGGTTATTTTACATGCTCTGCAAGCATCCTGATATCCAAGAAAAAATTGCACATGAAGTTCAAGCAGTAACAAAGTTGAACAACATTTGCAATATTGATGAACTTGCAGATAGGCTAACTGATGGGGCCCTTGAAAAGATGCATTATTTGCATGCAGCTTTGGCTGAGACACTCAGACTCTACCCTGCAGTTCCAGTGGATAGTAAACTTTGCTTATCAGGTGAAACATTGCCGGATGGATTTAGTATCAGGAGAGGTGATACTATAGCTTATCAGCCATATGCTATGGGCAGGATGAAATTCATATGGGGTGATGATGCTGAAGAATTTAAACCTGAGAGATGGATTGATGAAAGTGGAACTTTCCAACAAGAGAGTTCTTTCAAGTTCACTGCCTTTCAGGCTGGTCCAAGAATATGTCTAGGAAAGGATTTTGCATATAGACAGATGAAAGTTTTTACTGCTGTTCTTTCTTATAGCTACAAACTCAAGCTGGCTGTCCAAAATGAATCAGTTAATTACAAGACCATGCTCACTCTACATATTGATGGTGGTCTTCATCTACATGCTTCCCAAAGATTTGGTCCCATGTACTAG 1539 0.3944 MKFSYSPYDPITATATLGAIALIFFVIRTHFKRFNRSSKEKRHVVAGTILHQLFNFHRMHDYMTDLARKHKTYRLLNFPMCEVYTADPAIVEYILKTNFANYGKGWYHYGILTDLLGDGIFTVDGEKWQHQRKVSSYEIATKTVKDFSLQVFKSNAAKLARVVSKATISNETLDFKELFMKSTLDSVFKVILGVDLDTISGTNKEGTKFSNAFDEASAITLYRYVDIFWRIKRFLNIGTEAALRNHIKVVDEFVYKIIKSKIEQVQNLPHNLPMRREDMVSRFMASKETDPSYLRDIILNFMIAGRDTTAATLSWLFYMLCKHPDIQEKIAHEVQAVTKLNNICNIDELADRLTDGALEKMHYLHAALAETLRLYPAVPVDSKLCLSGETLPDGFSIRRGDTIAYQPYAMGRMKFIWGDDAEEFKPERWIDESGTFQQESSFKFTAFQAGPRICLGKDFAYRQMKVFTAVLSYSYKLKLAVQNESVNYKTMLTLHIDGGLHLHASQRFGPMY* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2440 512 Gene3D Cytochrome P450 39 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2440 512 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2440 512 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2440 512 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2440 512 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2440 512 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2440 512 SUPERFAMILY Cytochrome P450 45 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2440 512 Pfam Cytochrome P450 47 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2440 512 PANTHER - 14 509 - -
Lja2g2440 512 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2440 512 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2440 512 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2440 512 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2440 512 PANTHER CYTOCHROME P450 14 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2440 Lja-Chr2 30474981 30479658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2440 11 507 Cytochrome P450 AT2G45510 48.515 7.41e-170 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2440 - - twl:119985375 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2440 2 30474981 30479658 Lja2g2440 2 30474981 30479658 ECH