Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2439 ATGAAAGTTACTACTAATAACTTCTTCCATAAGTACTTTTCCTCCGAATGTGAAATCCTATCAAGTTTTCAACCATGCAGATCAGCGGCTGTCTTTAGAGTTAGGAGGCGCTCACCGGAGCTAGTGGCTCCATTAAACCCCACTCCACGTGACCTAAAGCAGCTATCTGAAATAGACTCTCAAATGAGTCTACATTGCCAGTTTCCATTGCTATATTTCTACCGCTACCATCCATTGATGGCAGGGAAAGACCCTGTTCAGGTTATTAGACAAGCACTTGCCAAAACACTTGTGTTTTACTACCCGTTCGCAGGAAGAATTAGGAAAGGTCCTAGTGGTAACAAACTAATGGTGGATTGTAATGAAGAAGGTGTCATGTTCATTGAAGCCGATGCAGATGTTACACTTGAACAATTTGGTGACAATTTTTTGCCCCCATTCCCATACTTTGATGAGCTCCTTTACAGTGTTCCAGGGAGTTGTTATGTGCAAGAAACCCACCAAGCTAGAGTTACATGCATCCACAAGGAATACGAGCAACTACCACCTGACGAAAAAAGCATCTTCACACCACAACATCGATCCTTCTTCTTTGGCCTCAAAGAAATATCTGCAATTCGTGCTCTTCTTCCCCACCACCTCGCTCATCAATCTACCTCCTTCGAGCTTGGCTATGGCGCTGCCGCACTAAACCGCACTAAAGCATTGCAGTGGGAAAATCCAGACCAAGAGGTTCGCCTATTGTGCGTTGTCAACGCGTTACGGACATGGCAGCTTCAACCCACCGCTACCGGAAGGTTATTACGGCAACACTGTCGTGTGTCCTGCGGCGGTTACCACCGTCGCGAAGCTGTGTAA 858 0.4604 MKVTTNNFFHKYFSSECEILSSFQPCRSAAVFRVRRRSPELVAPLNPTPRDLKQLSEIDSQMSLHCQFPLLYFYRYHPLMAGKDPVQVIRQALAKTLVFYYPFAGRIRKGPSGNKLMVDCNEEGVMFIEADADVTLEQFGDNFLPPFPYFDELLYSVPGSCYVQETHQARVTCIHKEYEQLPPDEKSIFTPQHRSFFFGLKEISAIRALLPHHLAHQSTSFELGYGAAALNRTKALQWENPDQEVRLLCVVNALRTWQLQPTATGRLLRQHCRVSCGGYHRREAV* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2439 285 PANTHER ALCOHOL ACYLTRANSFERASE 32 160 - -
Lja2g2439 285 PANTHER ALCOHOL ACYLTRANSFERASE 170 255 - -
Lja2g2439 285 Pfam Transferase family 34 156 - -
Lja2g2439 285 Gene3D - 32 198 IPR023213 -
Lja2g2439 285 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 32 160 - -
Lja2g2439 285 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 170 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2439 Lja-Chr2 30463236 30464443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2439 32 141 Monolignol Biosynthesis Gene Families AT5G48930 34.545 3.94e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2439 - K19861 gmx:100805516 200.675