Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2437 ATGCCATCTCGCAAACTTAACCAATTTCATCCCTCCACGTCAGACATTCCTGGCAGGTATCAACCGCCACAAACACCACACTCTCCTCATTCCCACCACCGCCACAATCTCCTAACCCCTCTTATCGCCGCCGCCGCTGCCGTCGCATGCTCCCTTCTCCTCCTCCTCGCCTTCCTCTACCGACGCACGCTCACCCGAAAACGCACCACCCCATTTCACTCCGACACCGACTCCTCCACTTCCGACCCTCCTCACCGCTTCTCATACTCCCTCCTCCGCCGTGCCACGAACTCCTTCTCCGTCCGCCTCGGCAACGGCGGCTTCGGCACCGTCTACGCCGGAACGCTCCCGCCGCCGTCGCGCAAGCCAATTGCAGTCAAGCTCATGGACCTCTCCTCCGGCGAGCGCGAGTTTCACAACGAGCTCTTCTTCGCCTCCAGGCTCCGCTCCCCCCACGTCGTCGCCGCCGTGGGATTCTCCTCCGACCCGAAACACCGCCGTTTCGTCCTCGTCTACGACCTCATGCACAACGGGAACCTCCAAGACGCTCTACTGCGCCGCAAGTGCCCTGAGCTCATGGAATGGAAAAAGCGCTTCGCGGTTGCTCTGGAAATAGCAAGAGGAATTCACTACCTTCACTCTTGCGACACCCCAGTGATTCACGGAGACATTAAACCCAGTAACATCTTGCTTGATCGCGGTTTCTCGGCCAAAATCGGCGATTTTGGGCTTGCCCGGTTGAAATCGGAGCCATCCCAGATTGAGCTAGAGGTTTTGAACGATGATAGCCACGATGAGGAGAAGAAAAAGTTGAAGTTAGAGCCACCCCAGGTTGAGGTAGAGCTTTTTATTGGTGATATTAACGATGAAGAGAAGAAAAAGAAGGAGGAATTGGAGTGTGATGGTGGTGGGGTTGTGATTGATGATTGTCAATCGATTGAGAGTGTGCATACTAGTTTTTTTGAAGAGGGTAATTTGGGTGTGGACCAATCTGTTACTTCGCCGGAGACTATTGTTGAGATGACTGTGATGAGTGGAATGGGAATGTCTCCGGTGGTGGCGGCTGAGTCGCCGGGATTTGATAAGGCTAGTGTGCAGAGTGAAAAGGATGTTGTTGGGGATGTTAAGAGGAATGGGAAAGGGTTAAGGAGTAATTCAGTGAAGGATTGGTGGCGGAAACAGGACAATGAGGTTGTGGGCTCGGGTTCGGGTTCAACGCCTGTTGGAGAAGGTAAGAAGGCGAAGGATTATGTGATGGAGTGGCTTGGAAGGGAGGTTAACAGGGAAAAGCCAAAGAGTGAATGGATTGGAGGGAAGATGGGGAAGGCAGAGGAGAAGAAGGGGAAGAAGAAGAGCAGGGAGCGCCAATTGGAATGGTGGGAATCGATGGACGAGGAAAAGGTTGATGGAGTTGTGAAGAAGAAGAGAAGGCCAGTGAGGGAATGGTGGAAGGAAGAGAGCTGTGAAGAGATTGCAAAAAGGAAAAAGAAGAAGAAGAAGAAAAAGGGTGTAGAGAGTGATGGTGATGATTGGTGGATGAGTGATGATGCATTATATGGGGATAGAAAGAAGTACAAGAGTCGAAGCAAGAATAACCGTGGTAGTGTGGATTGGTGGTTAGATGGATTCAGTGGTGAGCTATGGAAAGCGCGGAGGAATAGCTTTGATTCTGTTAGTGGAGAAATTCCAAAGAGTGGTGGTGTGAGCAGTACACCAAGTATGAGGGGAACTGTTTGTTATGTTGCTCCTGAGTATGGCTGTGGTGGAGATGTCTCGGAGAAGTGTGATGTGTATAGCTTTGGGGTCTTGTTGCTTGTTCTCATTTCCGGGAGGCGCCCCCTTCAGGTGACTGGTTCACCAATGTCTGAGTTTCAAAGAGCAAATCTTTTGTCATGGGCGCGTCATTGTGCCAGAAATGGGAAGCTCATGGAGCTGGTTGATCAGTCTATTCAGTCATTGGACAAAGAGCAGGCTCTTCTCTGCATTAAGGTTGCTTTGCTTTGTTTGCTTAAGTCACCTGTTCGTCGTCCTTCAATGAAGGATGTTGTGGGAATGCTTAGTGGGGATTTGGAGCCTCCCCAATTGCCGGTTGAATACTCACCTTCAACCCCTTCCCGCTTCCCTTTCAAGTCCAGGAAAAAAGGCCGGTGA 2151 0.5128 MPSRKLNQFHPSTSDIPGRYQPPQTPHSPHSHHRHNLLTPLIAAAAAVACSLLLLLAFLYRRTLTRKRTTPFHSDTDSSTSDPPHRFSYSLLRRATNSFSVRLGNGGFGTVYAGTLPPPSRKPIAVKLMDLSSGEREFHNELFFASRLRSPHVVAAVGFSSDPKHRRFVLVYDLMHNGNLQDALLRRKCPELMEWKKRFAVALEIARGIHYLHSCDTPVIHGDIKPSNILLDRGFSAKIGDFGLARLKSEPSQIELEVLNDDSHDEEKKKLKLEPPQVEVELFIGDINDEEKKKKEELECDGGGVVIDDCQSIESVHTSFFEEGNLGVDQSVTSPETIVEMTVMSGMGMSPVVAAESPGFDKASVQSEKDVVGDVKRNGKGLRSNSVKDWWRKQDNEVVGSGSGSTPVGEGKKAKDYVMEWLGREVNREKPKSEWIGGKMGKAEEKKGKKKSRERQLEWWESMDEEKVDGVVKKKRRPVREWWKEESCEEIAKRKKKKKKKKGVESDGDDWWMSDDALYGDRKKYKSRSKNNRGSVDWWLDGFSGELWKARRNSFDSVSGEIPKSGGVSSTPSMRGTVCYVAPEYGCGGDVSEKCDVYSFGVLLLVLISGRRPLQVTGSPMSEFQRANLLSWARHCARNGKLMELVDQSIQSLDKEQALLCIKVALLCLLKSPVRRPSMKDVVGMLSGDLEPPQLPVEYSPSTPSRFPFKSRKKGR* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2437 716 Gene3D Transferase(Phosphotransferase) domain 1 85 268 - -
Lja2g2437 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lja2g2437 716 MobiDBLite consensus disorder prediction 1 27 - -
Lja2g2437 716 MobiDBLite consensus disorder prediction 690 716 - -
Lja2g2437 716 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 18 716 - -
Lja2g2437 716 ProSitePatterns Protein kinases ATP-binding region signature. 103 127 IPR017441 GO:0005524
Lja2g2437 716 PANTHER OS07G0586332 PROTEIN 18 716 IPR044576 -
Lja2g2437 716 ProSiteProfiles Protein kinase domain profile. 97 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2437 716 Pfam Protein tyrosine and serine/threonine kinase 101 251 IPR001245 GO:0004672|GO:0006468
Lja2g2437 716 Gene3D Transferase(Phosphotransferase) domain 1 555 692 - -
Lja2g2437 716 SUPERFAMILY Protein kinase-like (PK-like) 75 705 IPR011009 -
Lja2g2437 716 MobiDBLite consensus disorder prediction 1 34 - -
Lja2g2437 716 SMART serkin_6 97 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2437 Lja-Chr2 30432260 30435266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2437 564 686 Receptor kinase-like Gene Family AT3G58690 34.884 2.12e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lja2g2437 PK_Tyr_Ser-Thr 2.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2437 - - lja:Lj2g3v0473820.1 1269.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2437 2 30432260 30435266 Lja2g2437 2 30432260 30435266 ECH