Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2428 ATGCCCATCTTTCCCTTATCAAACTCTAAATGCTCTTATGCAACCTTAATTACATTTGCAATATTCTCCTCAACTTTCCTCTTCATAGTAAATTCATCCACACCTAATTCATGTAACGATCCTTACAAGCAACTAAACCTCATCCATAACCCGAATGGTTCAGTCACTCGCCCAAACAAGCCTCCAGAGAGCCCTCCCTCACTGAATCCCACCCTCCCCGTGCTCTCCAAGGACCTCACCATCAACAAATCAAAGGGCACATGGGCAAGGATCTACCTACCCCGCAAAGCACTGGACCATAGCTCTAAGCTTCCCTTGGTGGTTTTCTTCCATGGAGGAGGGTTCATCTTCCTCAGTGCAGCCTCAACAATCTTCCATGTTTTCTGCTTCAACATGGCTAACGATGTTGAAGCGGTGGTTGCGTCCGTAGAGTACCGTCTCGCACCAGAACATAGACTCCCCGCGGCGTATGATGATGCTGTGGAGGCGCTGCACTGGATCAAAACCAATCAAAAAGATGATTGGCTCATCAACCATGTTGAGTATTCTAATGTGTTTCTCATGGGTGGTAGTGCAGGAGGAAACATAGCCTACAACGCGGGCTTACGTGCAACTGCTGGAGATAAACAAGTTTCTAACATCCAAGGGCTGATATTGGTTCAACCATTTTTCAGTGGGACCCTTAGGACCGGTTCAGAATTGAGGATGGTGAATGATTCTCATCTGTCACTGTGTTCTAATGACATGCTGTGGGAGTTATCTCTACCCGTTGGAGTCAACCGTGATAATGAGTATTGCAATCCTGCGGTGGGGAACGGTCCTGTGAGATTGGAAGAGATCAAACGGCTTGGATGGAGGATATTAGTGACCGGCTGTTCGGGTGACCCGCTCATGGATCGGCAAGTGGGGCTGGTGAGGTTGATGCAGAAGGAGGGTGTGAGAGTTGTGGGACATTTCACGGAAGGAGATTATCATGGTGTCCAAGACAGTGAGCCTTTGAAAGCAAAGCAACTCTTTGTGGTAATCAAGAGGTTTATTTCATCTTTGCCTCCCTAG 1056 0.4763 MPIFPLSNSKCSYATLITFAIFSSTFLFIVNSSTPNSCNDPYKQLNLIHNPNGSVTRPNKPPESPPSLNPTLPVLSKDLTINKSKGTWARIYLPRKALDHSSKLPLVVFFHGGGFIFLSAASTIFHVFCFNMANDVEAVVASVEYRLAPEHRLPAAYDDAVEALHWIKTNQKDDWLINHVEYSNVFLMGGSAGGNIAYNAGLRATAGDKQVSNIQGLILVQPFFSGTLRTGSELRMVNDSHLSLCSNDMLWELSLPVGVNRDNEYCNPAVGNGPVRLEEIKRLGWRILVTGCSGDPLMDRQVGLVRLMQKEGVRVVGHFTEGDYHGVQDSEPLKAKQLFVVIKRFISSLPP* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2428 351 MobiDBLite consensus disorder prediction 50 71 - -
Lja2g2428 351 Gene3D alpha/beta hydrolase 42 349 IPR029058 -
Lja2g2428 351 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 107 123 IPR002168 GO:0016787
Lja2g2428 351 PANTHER CARBOXYLESTERASE 120-RELATED 35 348 - -
Lja2g2428 351 PANTHER ARYLACETAMIDE DEACETYLASE 35 348 - -
Lja2g2428 351 Pfam alpha/beta hydrolase fold 107 327 IPR013094 GO:0016787
Lja2g2428 351 SUPERFAMILY alpha/beta-Hydrolases 61 335 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2428 Lja-Chr2 30281864 30283586 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2428 52 326 Carbohydrate Esterase AT5G16080 38.112 3.10e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2428 - - gmx:121172763 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2428 2 30281864 30283586 Lja2g2428 2 30281864 30283586 ECH