Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2426 ATGTCCAACCAATTAACATGCCCAAAATCTCAAACCATCGACCCCTACCAGAACATGAATCTGGTTGTGAACTCCGACGGCACGCTATCTCGCTTATTTGAAGATCCACTCATCTTACCTTCATCAGACGCCACTCTTTCAGTTCTCACCAAAGATATCCCAATCAACCCATCAAACAACACCTGGCTTCGTTTATTCTTACCTCGAAACGCAACCCTTAATCACAACCAACAACAAAAGCTTCCCCTCATTCTTTTCTTCCATGCCGGTGGCTTCATTGTGCTCAGTGCTGCTTCCACCTTGTTCCACAGCTTCTTAGTGGAAATGGCGGAAACTGTCCAAGCCATCGTTGCCTCCGTCGAATACCGCCTCGCGCCGGAGCACCGGTTACCAGCCGCGTATGACGACGCCATGGAAGCGCTGCACTGCATCAGAACCAGCAAAGATGAGTGGCTGACAAAATATGCTGATTACTCTAATTGTTACCTGATGGGAAGCAGCGCTGGGGGAAATATCGCATACCATGTAGGTCTACGTGCTTCAGCGGAGGTGAATGATCTTGAGCCGTTGAAGATTCAAGGGTTGATATTGCGGCAACCATTCTTTGGTGGGACCAAGAGGACTGACTCAGAGTTGAAGTATGAGAATAACCATGTTATCCCCTTAACTTTTACTGATCTCATGTGGGAGCTTGCATTGCCAATTGGTGCTAATCGTGATCATGAGTATGCTAATCTGACAGCTGGGGTTGGTTTTGATGAGAAGCTGGATAAGATAAGGGAACTTGGGTGGAGGGTATTGGTGAGTGGGACCGGTGAGGATCCTCTGGTGGATCTTGAGAAGGAGTTGGTGATGTTAATGGAAGAGAAGGGTGTGCATGTGGTTAAGGATTTTCTGGAAGAAGGTTATCATGTGGTGGAGTATTTTGATCCATCAAAAGCAGAGCATGTGATTAGCTCGGTGAAAGCTTTCATTTTCTCTTCGGGTCCATAA 993 0.4703 MSNQLTCPKSQTIDPYQNMNLVVNSDGTLSRLFEDPLILPSSDATLSVLTKDIPINPSNNTWLRLFLPRNATLNHNQQQKLPLILFFHAGGFIVLSAASTLFHSFLVEMAETVQAIVASVEYRLAPEHRLPAAYDDAMEALHCIRTSKDEWLTKYADYSNCYLMGSSAGGNIAYHVGLRASAEVNDLEPLKIQGLILRQPFFGGTKRTDSELKYENNHVIPLTFTDLMWELALPIGANRDHEYANLTAGVGFDEKLDKIRELGWRVLVSGTGEDPLVDLEKELVMLMEEKGVHVVKDFLEEGYHVVEYFDPSKAEHVISSVKAFIFSSGP* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2426 330 Pfam alpha/beta hydrolase fold 84 305 IPR013094 GO:0016787
Lja2g2426 330 SUPERFAMILY alpha/beta-Hydrolases 44 325 IPR029058 -
Lja2g2426 330 Gene3D alpha/beta hydrolase 16 328 IPR029058 -
Lja2g2426 330 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 8 324 - -
Lja2g2426 330 PANTHER ARYLACETAMIDE DEACETYLASE 8 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2426 Lja-Chr2 30236888 30238825 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2426 23 330 Carbohydrate Esterase AT1G68620 35.849 1.86e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2426 - - gmx:100795069 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2426 2 30236888 30238825 Lja2g2426 2 30236888 30238825 ECH