Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2418 ATGGGCAAGGAGTGGCATTGGGCTGGGAAATCTTCTAAGAGAAATGGAGTAGAAGCTGAAGCTGCAGAAACAACACCTTCTGGTTGCATGTGTGCTGTCTTTCAGTTCTTTGATTTCCGTCCATTTCACTTCCCCACCTTAAACCAGCAACAACAACAACATCAACAAACCTCTTTCAAATCACCCTCTTGCATCCCACAAGACAGTATAACTATCCCCAAAGGAGCTGAAGCACCTAGAAATAGCTTAGAATCAGTGGATGGAACAGTTTCCTCTCCCTCAAAAGAAGAAAATTTTAAAATCCCAAAGAATATACAAATCAAAACAAGGGGCAGCACAGTAGCAAATGCTGGAAATTTGAATGATTTATCCTCTCCAGGGGCAAAGACACCAACTTTGGTTGCAAGATTAATGGGTTTGGAACTTCTACCTGGTTTAAACTCACCCACTTCTTCTTCATGCCTTTCCACTCCAAACTCACAGGGCAATGTTCCTCATATGCATCACCTGAAACTTCACAAACACATCCAAACCAAACCAAGAAACAGCACAGAATACAGTGGTGATCATCACATTGCAGCATCTCGCTCCTTGCCTGAGACACCAAGAATCTCCTCTGCCAGAAGATCAGATGTTGACCATCACAGACTCTCTCTCCAAATAATCAAGGAGAAAAGCATGATGAGCCTTGGTGAGGATTTGGAGTTGCCTCGGCTTTCGTTAACGAAGAAGAAACGTGATGAGAACAATAGCAGAAGTCCAAGCCAGTCTGCTCGGCAAATTGTCAAACAGGTTAAGGACAGTTTGAGCAGAAAAGTTGGGCAAGACATTACCAACACTCTCAAAACTAGAGATCAAGAATTGGTAACCCAATTGAGAATCAAGAAGTCTTCAAAGTCACCATCATTGAAAACACTTGATGAATCAAGCCCAGGAAAACAATCAAACTCATCACATTCCCCAAGGCTCAGATTCATGGACACCAAGCACAAGCCAAGCACAACAACAACACCATCACCACACACCACAAAAGATCAAAACACAAACCAACCAGTGCTGAAACTACCACCAGAGCTTCCAAGAGTTTTGACAAAGCCAAAGCATCAAGCATTTCCAGAGCAACAAGAGTTGCACAACCAGAAAGTTTCTGTTCCAAAATGTAAGAAGGTGACTAGTGAAAAGTTCAGCTCCAGGTTCAAAAGGCCTCCACAGACAACAGACATAATCAGAAACAAGCACGAAGAGCCATTCAAGTTTAGTCCAACATCACCTATCAGAGCAAATGACATCAAAAATACCAAAAGCAAGAAAACTCATCCATTGTCAAGTAATCTCCTTAATAACATCATCAACACTGTTCCAAATGTTCTCTCTGTCAAGACAGAGCCTTCTCCTCCAGCAACTAAAATTGCTCAAAAACAGGTATCTGATGCCAAAGAGTCCAAACACAGCTCACAATTATCTAGTTGTGCGCGCCAGAGGTACAAACAAGAAGGAACAATAAATACAGAGTCTACCGCCACCAGAGAAACAACCACCAACAATGAAGACAAACCCAACTGTGCTTCCACCACCACCGCAGCTCAAGAATATCAAAACCCAGAATTTCAGTACATCACACAAATCCTAAACCGTACAATAAATACAGAAGCTACCACCAACACCACAAAACTAGTGCCACTTGACCCATCAATCTTCCACCACCTGGAAAGCCAGTGTGACAATAAACATCGCAACATTACCCCAAAAAACCAACTGGGTCATCGTTGGAACCGAAGATTACTGTTCGATCTGGTAGATGAAGTTCTGGAGGAGATTCTGATGCCTAAAGGGTGTGCAAAAAAGCTCTGGTTATTCTACAGAAGCAAGAGTGTGGGAGAGTTGACAGAGAGAGTGTGGAAGAGGGTTGAGGACTTCCCACGTGCGAGGTGTGAGGTTTTAGAAGACATTGATGCGTTGATAGAAGCAAAGGACATGGAGAAAGTGAAGATGGAAGGTGAAGAAGAAGGAGAAAGGATGGTGACAGAAATCGAAGGGAACATATGGGACACGTTGGTGCATGAAACGGTTATGATGATGGAAAGTGGTGGGGTTCAACACCGTGACGGCGTCGTTTTGTGA 2121 0.4323 MGKEWHWAGKSSKRNGVEAEAAETTPSGCMCAVFQFFDFRPFHFPTLNQQQQQHQQTSFKSPSCIPQDSITIPKGAEAPRNSLESVDGTVSSPSKEENFKIPKNIQIKTRGSTVANAGNLNDLSSPGAKTPTLVARLMGLELLPGLNSPTSSSCLSTPNSQGNVPHMHHLKLHKHIQTKPRNSTEYSGDHHIAASRSLPETPRISSARRSDVDHHRLSLQIIKEKSMMSLGEDLELPRLSLTKKKRDENNSRSPSQSARQIVKQVKDSLSRKVGQDITNTLKTRDQELVTQLRIKKSSKSPSLKTLDESSPGKQSNSSHSPRLRFMDTKHKPSTTTTPSPHTTKDQNTNQPVLKLPPELPRVLTKPKHQAFPEQQELHNQKVSVPKCKKVTSEKFSSRFKRPPQTTDIIRNKHEEPFKFSPTSPIRANDIKNTKSKKTHPLSSNLLNNIINTVPNVLSVKTEPSPPATKIAQKQVSDAKESKHSSQLSSCARQRYKQEGTINTESTATRETTTNNEDKPNCASTTTAAQEYQNPEFQYITQILNRTINTEATTNTTKLVPLDPSIFHHLESQCDNKHRNITPKNQLGHRWNRRLLFDLVDEVLEEILMPKGCAKKLWLFYRSKSVGELTERVWKRVEDFPRARCEVLEDIDALIEAKDMEKVKMEGEEEGERMVTEIEGNIWDTLVHETVMMMESGGVQHRDGVVL* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2418 706 MobiDBLite consensus disorder prediction 292 322 - -
Lja2g2418 706 MobiDBLite consensus disorder prediction 292 354 - -
Lja2g2418 706 MobiDBLite consensus disorder prediction 462 522 - -
Lja2g2418 706 MobiDBLite consensus disorder prediction 179 214 - -
Lja2g2418 706 MobiDBLite consensus disorder prediction 241 269 - -
Lja2g2418 706 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 695 - -
Lja2g2418 706 Pfam Domain of unknown function (DUF4378) 535 688 IPR025486 -
Lja2g2418 706 MobiDBLite consensus disorder prediction 416 439 - -
Lja2g2418 706 Pfam DUF761-associated sequence motif 122 144 IPR032795 -
Lja2g2418 706 MobiDBLite consensus disorder prediction 481 522 - -
Lja2g2418 706 MobiDBLite consensus disorder prediction 48 97 - -
Lja2g2418 706 MobiDBLite consensus disorder prediction 330 353 - -
Lja2g2418 706 MobiDBLite consensus disorder prediction 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2418 Lja-Chr2 29896304 29900820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2418 104 689 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.967 4.47e-51 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2418 - - gmx:100795947 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2418 2 29896304 29900820 Lja2g2418 2 29896304 29900820 ECH