Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2411 ATGGGCAAAGGGGGAATGTCACTTGATGATCATGGTGGTGAAGAACAGGAGAACATGGCTGCTTGGCTTGTTGCTATTAACACTCTCAAGATTCAGCCTTTTAAGCTTCCTACACTAGGACCCCATGATGTCAGAGTGAGAATGAAGGCTGTTGGAATCTGTGGAAGTGATGTTCACTACCTCAAGAAACTGAGATGTGCAGACTTCATAGTTAAAGAACCAATGGTTATTGGTCATGAGTGTGCTGGGATAATAGAAGCAGTTGGTGCTGAGGTGAAGAGTTTGGTGCCTGGTGACCGCGTGGCAATTGAGCCTGGGATCAGTTGTTGGCGTTGTGACCATTGCAAGCTGGGTAGCTATAATTTATGTCCTGATATGAAGTTTTTTGCTACTCCACCAGTTCATGGTTCCCTGGCTAATCAGATAGTGCATCCAGCAGATCTATGTTTCAAACTACCAGACAATGTGAGCTTGGAGGAGGGAGCAATGTGTGAACCCTTAAGCGTTGGTGTTCATGCTTGTAGGCGAGCTAATATTGGACCAGAAACAAATGTGTTGATCATGGGAGCAGGACCCATTGGACTTGTTACAATGCTTGCAGCTCGGGCTTTTGGGGCGCCTAGGATAGTCATTGTGGACGTGGATGACCATCGTTTATCCGTTGCAAAAACTCTCGGTGCAGATGATATTTTCAAAGCTTCAACCAACATTCAGGATGTTGCTGAAGAAGTCAAGCAGATACATAAGGTTATGGGAACTGGTATAGATGTTACCTTTGATTGTGCTGGTTTTGACAAAACCATGTCTACAGCACTGACTGCTACTAAGCCAGGTGGCAGAGTTTGCCTTGTGGGAATGGGTCATTCTGAAATGACTGTCCCACTCACCCCAGCTGCTGCAAGGGAAGTTGATGTGATTGGCATTTTCCGCTATAAGAACACATGGCCTCTTTGCCTTGAGTTTCTGAGGAGTGGCAAAATCGATGTGAAACCCCTTATAACTCATAGGTTTGGGTTCTCTCAGAAGGAAGTGGAAGAAGCCTTTGAAACTAGTGCTCGTGGTGGTAATGCCATTAAGGTCATGTTCAATCTTTAG 1095 0.4539 MGKGGMSLDDHGGEEQENMAAWLVAINTLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHYLKKLRCADFIVKEPMVIGHECAGIIEAVGAEVKSLVPGDRVAIEPGISCWRCDHCKLGSYNLCPDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDHRLSVAKTLGADDIFKASTNIQDVAEEVKQIHKVMGTGIDVTFDCAGFDKTMSTALTATKPGGRVCLVGMGHSEMTVPLTPAAAREVDVIGIFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2411 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 328 IPR036291 -
Lja2g2411 364 CDD sorbitol_DH 20 363 IPR045306 GO:0016616
Lja2g2411 364 Pfam Zinc-binding dehydrogenase 192 322 IPR013149 -
Lja2g2411 364 Pfam Alcohol dehydrogenase GroES-like domain 41 152 IPR013154 -
Lja2g2411 364 SMART PKS_ER_names_mod 24 362 IPR020843 GO:0016491
Lja2g2411 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Lja2g2411 364 Gene3D - 169 309 - -
Lja2g2411 364 PANTHER L-IDONATE 5-DEHYDROGENASE 14 364 - -
Lja2g2411 364 Gene3D - 29 350 - -
Lja2g2411 364 SUPERFAMILY GroES-like 18 190 IPR011032 -
Lja2g2411 364 PANTHER SORBITOL DEHYDROGENASE 14 364 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2411 31 297 Monolignol Biosynthesis Gene Families AT4G37980 28.058 5.54e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2411 K00008 - gmx:100820630 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2411 2 29599137 29609225 Lja2g2411 2 29599137 29609225 ECH