Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2403 ATGAGGTTGGCCTTTAAAAAAAGCTTTTGCTATGTGGTGGTGGTGTTGTTTGTGTCATTGAACTTGGTCTTGTGTGTTGAAGATTTTCATCCAGAAGAAAGAGATGCTTTGTTAGTCATAAGGGATTCTTTAAATTCTTCTCTTGATTTGCATGGGAATTGGACAGGGCCTCCTTGTATAGAGAATCTTAGTAGATGGATTGGTGTCACTTGTTCCAATTGGCATGTTGTTCATATTGTTCTTGAAGGAGTTAACCTTAGTGGCTTTTTACCTCCCACATTCCTTCAAAACATAACTTTGTTGACCCAGATTAGCTTCAGAAACAATGCAATTTTTGGGCCTCTACCAAACCTCACAAGTTTGGTGTTTTTGGAACAGGTCTTGCTCTCATTCAATCGTTTCTCAGGGTCAATTCCTGGGGAGTATGTTGAATTGCAAAGTCTTGAAGTGTTGGAGCTGCAACAAAACTACTTGGATGGTAAAATTCCACCCTTTGATCAACCATCATTGACAAGTTTCAATGTGTCATACAATCATCTGGTAGGGCCAATTCCTGAAACTTCTGTTCTTCAAAAGCTCCCAAAGAGTTCATTTGATAATAATTCAGATCTTTGTGGAAAGCAATTGGATAAGTTATGTCCTGCTGAACCTCCTGCTCCACCTCCAATCCCTGCAGTGGAAAGAAATAAGAAGAGACTTCATGTATGGATTATTGCTTTGATTGCTTCTGCAGCTGCACTGTGTCTTTTTCTGATCATTATTTCTTTCTTGTTTTCTATAAGAAAAGCAAGTAGAAAAGAAACAAGAAGAGATGGTTCAGCAGGGTATGTTTTTGGAGCATGGGCAAGGAAGATGGTGTCTTATCCAGGGAACAGTGAAGAGTCTCAAAGATTAGGCCAATTAGAATTTTCCAACAAGAATTTCCCAGTTTTTGACTTGGATGATTTATTAAGGGCATCAGCACAAGTTCTAGGAAGAGGGAACTTAGGTGTTACATACAAAGCAACACTTGAAACTGGCACTGTTGTTGCAGTGAAGAGACTTAGCTCCATGAGTGAATTGAGCAGGAAGGAGTTTCTGCGGCAGATGCAATTGTTAGGACAGATAAAGCATGAAAATATAGTAGAAATTATATCCTTTTATTATTTAGAGGAGCAAAAGCTGATCATATATGAACTCACCTCTGATGGCAGTTTATTTGAACTCCTACATGAGGGTAGAGGAGCTGGAAGAGTATCTCTTGATTGGACCACAAGGCTAGCTATTATCAAAGACATAGCAAAAGGTCTTGCTTTCCTTCATCATTCTTTGTCTTCTCACAAGGTTCCTCATGCCAACCTCAAATCATGCAATGTCATAGTCCATCAAGATAGCCAAGGCTACCATTCCAAGCTCACAGACTATGGCTTCTTACCTCTACTCAAAGGTAAAAAGAATGCAGAAAAGCTAGCCATAAGCAAGTCGCCAGAATTTGTTAAAGGGAATAAGAAGCTGAGTCACAAAGCTGATGTTTATTGCTTTGGTATCATCATGCTAGAGATCATAACTGGTAAAGTTCCTGGTCAAATCTTAGGAGTTGAGGAAACAACCAGTGATCTTTCAGATTGGGTGAGAACAGTGGTGAACAATGATTGGTCCACAGATATATTGGATTTAGAGATTCTAGCAGAAAAAGAAAGGCATGATGGAATGTTGGAGCTAACAGAGCTGGCTCTGGAGTGTACAGATATGGCACCAGAGAAAAGGCCAAAAATGAGTGAAGTGTTGAAGAGAATGGAAGAGATAGAGCAAATAAAAATAGAGAATGACTAA 1812 0.3935 MRLAFKKSFCYVVVVLFVSLNLVLCVEDFHPEERDALLVIRDSLNSSLDLHGNWTGPPCIENLSRWIGVTCSNWHVVHIVLEGVNLSGFLPPTFLQNITLLTQISFRNNAIFGPLPNLTSLVFLEQVLLSFNRFSGSIPGEYVELQSLEVLELQQNYLDGKIPPFDQPSLTSFNVSYNHLVGPIPETSVLQKLPKSSFDNNSDLCGKQLDKLCPAEPPAPPPIPAVERNKKRLHVWIIALIASAAALCLFLIIISFLFSIRKASRKETRRDGSAGYVFGAWARKMVSYPGNSEESQRLGQLEFSNKNFPVFDLDDLLRASAQVLGRGNLGVTYKATLETGTVVAVKRLSSMSELSRKEFLRQMQLLGQIKHENIVEIISFYYLEEQKLIIYELTSDGSLFELLHEGRGAGRVSLDWTTRLAIIKDIAKGLAFLHHSLSSHKVPHANLKSCNVIVHQDSQGYHSKLTDYGFLPLLKGKKNAEKLAISKSPEFVKGNKKLSHKADVYCFGIIMLEIITGKVPGQILGVEETTSDLSDWVRTVVNNDWSTDILDLEILAEKERHDGMLELTELALECTDMAPEKRPKMSEVLKRMEEIEQIKIEND* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2403 603 Gene3D Transferase(Phosphotransferase) domain 1 395 602 - -
Lja2g2403 603 ProSiteProfiles Protein kinase domain profile. 318 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2403 603 Gene3D Phosphorylase Kinase; domain 1 285 393 - -
Lja2g2403 603 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 597 - -
Lja2g2403 603 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Lja2g2403 603 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 11 597 - -
Lja2g2403 603 SUPERFAMILY L domain-like 30 196 - -
Lja2g2403 603 SUPERFAMILY Protein kinase-like (PK-like) 322 593 IPR011009 -
Lja2g2403 603 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Lja2g2403 603 Pfam Protein kinase domain 321 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2403 Lja-Chr2 29451602 29454617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2403 33 595 Receptor kinase-like Gene Family AT1G48480 35.360 7.84e-100 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja2g2403 Pkinase 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2403 - - gmx:102668068 873.233