Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2401 ATGAGAGAAAACATGTCAGGAACATGGCTGGTTGTGATCACTGTGATATTGGCCACTGCAATATTTGCAAAAGTAATTCAAGTCAAGTCAAGGAAGGAAAGCAAAAGAAAATGCAGATTACCACCAGGAAGGAGAGGGTGGCCTTTGATTGGTGACAGCATCAATTGGTACAATGCAGTTGCAAGTTCTCATCCTCCTCAGTTTGTTGAAGAAATGATGCAGAGGTATGGTAAGATATTTTCTTGCAGCCTATTTGGCAAATGGGCAGTGGTATCAGCAGATCCAAGCTTCAACCGGTTTGTAATGCAAAATGAAGGCAAATTATTCATGTCAAGTTACCCTAAATCTTTCAGAGATTTGGTTGGTAAAAATGGTGTGATCACAGTGCAAGGAGAGCAGCAAAGGAAACTACACGGGATCGCTTCGAACATGATGCGCCTAGAGAAGCTTAAGTTCCATTTCTTGAATGATATACAAAAGGTCATGCTCCAAACTTTGAGCAACTTTGACAACAACCAAGTCATTCTTTTGCAGGATGTTTGTAGAAAGGTAGCTATAAATTTAATGGTTAATCAACTACTTGGGGTTTCAAGTGAGTCTCAAGTGAATGAAATGGCTCAGTTGTTTTCTGACTTTGTTGATGGTTGTCTATCTGTTCCTATCAACATCCAAGGCTTTGCATACCACACAGCTATGAAGGCAAGGGAGAAAATCATAAGCAAGATAAACAAGACTATAGAGGTACACAGACAAAACGGCGCTCCCACAGAAGGTAGTGGTGTACTTGGAAGACTAATAGAGGAAGAAAGCTTGCCAGATGGTGCTGTTGCAGACTTCATCATCAATCTTCTCTTTGCAGGGAACGAAACAACCACCAAGACAATGCTTTTTGCAGTCTATTTCCTTACTCAATGTCCTAGAGCCATGAAGCAATTGCTGGACGAACAGGATTCTCTAAGAAGTAATTCTGGAGAGGAATTTCTTACATGGCAGGATTATAAAGCAATGCCTTTCACTCAATGTGTTATTGATGAAACACTTAGACTTGGGGGCATTGCAATTTGGTTAATGAGAGAAGCAAAACAAGACATTCCATACCAAGATTTTGTTATTCCCAAGGGATGCTTCGTGGTTCCATTTCTTTCAGCAGTTCATTTAGATGAATTAGTATATAATGGTGCTCAAAACTTCAATCCTTGGAGATGGATGGAACCTGAAAATGAGGAAAAGAGAAACTGGAGAACCAGTCAATTGTATGCACCCTTTGGAGGAGGTGCTAGATTCTGTCCTGGAGCAGAGCTAGCTCGCCTTCAAATTGCTCTTTTTCTTCATCACTTTGTCACTACCTACAGATGGACACAAATGAAGGAAGATAGGATATCCTTCTTTCCCTCTGCTAGATTAGTGAATGGCTTTGAAATCTGTCTAACGAGAAGACATGTTGATGAAACAAATTGA 1458 0.404 MRENMSGTWLVVITVILATAIFAKVIQVKSRKESKRKCRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMMQRYGKIFSCSLFGKWAVVSADPSFNRFVMQNEGKLFMSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDIQKVMLQTLSNFDNNQVILLQDVCRKVAINLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSVPINIQGFAYHTAMKAREKIISKINKTIEVHRQNGAPTEGSGVLGRLIEEESLPDGAVADFIINLLFAGNETTTKTMLFAVYFLTQCPRAMKQLLDEQDSLRSNSGEEFLTWQDYKAMPFTQCVIDETLRLGGIAIWLMREAKQDIPYQDFVIPKGCFVVPFLSAVHLDELVYNGAQNFNPWRWMEPENEEKRNWRTSQLYAPFGGGARFCPGAELARLQIALFLHHFVTTYRWTQMKEDRISFFPSARLVNGFEICLTRRHVDETN* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2401 485 SUPERFAMILY Cytochrome P450 35 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2401 485 Gene3D Cytochrome P450 29 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2401 485 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2401 485 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2401 485 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2401 485 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2401 485 PANTHER CYTOCHROME P450 SUPERFAMILY PROTEIN 3 477 - -
Lja2g2401 485 PANTHER CYTOCHROME P450 26 3 477 - -
Lja2g2401 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Lja2g2401 485 PRINTS E-class P450 group IV signature 429 447 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2401 485 PRINTS E-class P450 group IV signature 413 429 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2401 485 PRINTS E-class P450 group IV signature 277 303 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2401 485 PRINTS E-class P450 group IV signature 67 90 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2401 485 PRINTS E-class P450 group IV signature 385 403 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2401 485 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2401 485 Pfam Cytochrome P450 41 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2401 Lja-Chr2 29430167 29434024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2401 6 485 Cytochrome P450 AT1G73340 71.369 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2401 - - gmx:100806921 897.501