Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2373 ATGTATGATTGTGATGAATGTGGTATTGCTTTGCATAAACTTCTCTTATTGGGCAGGGATGGAGATGAGCGTGAGTTTATTGAAAGGATTGTCAAAGTGGTCTCTAGTAGGATTAATCGGCTTCCTTTATATGTTGCGGATTACCCGGTTGGTTTGGAGTCTCGATTGCAAGAAGTTTGCTCGTTTTTGGATGTTGGATCTGATCATAGAGTCCTCACGGTAGGGATTTGGGGGATGGGCGGAATAGGTAAGACAACCCTTGCTCGAGCAGTTTCCAATTTGGTTGGTGATCACTTTGAAGGTTTAAGTTATTTGGATAATGTGAGAGAAGTTTCAAGTAAGCATGGGTTAGTACATCTCCAAAAGAAGCTCCTTCTTGACATGCTTGGCAAGAAGGATTTTCTTTTTGAAAGTGTCTATGAAGGAGCTTCTGTCATAAAGACGATGATCCACCGAAAGAAAGTCCTTTTGATTGTAGATGATGTGGACAGTATAGAGCAATTGAGGGCTTTGGTTGGAGGACCTGAATGGTTTGGTTCTGGTAGCCGAGTTATCATTACAACTCGGGACAAACATTTGCTTGTACATCAAGGGGCTGATAAAATATACGAGGCAAGAGAGTTAAATTTCACTGAGTCTCTTGAATTGCTTAGGTGGAATGCTTTTAGATATGGCAATGTTGATCCAAGTTACACAGAAGTTTTAAACCAAGTTGTAGCTTATGCTTCTGGCCATCCGTTGGCTTTGGAAGTAATAGGTTCCAACATGTTCAAAAAAAGTGTGGCGGAATGGACATCAGCATTAAATCGGTTAAAAAGGATTCCTCACAAAGGTATTCAGAGCATGCTCAAAGTAAGCTATGATTATTTGGGGGAAGATGAGAAAAGAGTCTTTCTTGACATTGCTTGCTGCTTCAAAGGATATGATTTGACTGAGGTTGAAGATATACTTCGTGCTCATCATGGTTACAACATGAAACATCATATTGGAGTGTTGATTGAAAAATCTCTCCTAAGTGTTAGTTCAGATGGTAAGGTAACACTACATCCCTTGCTAGAGGACATGGGTAAAGAAATTGTCCGCCAGGAATCACCGGCAGAGCCAGGGAGACGCAGTAGATTATGGTTCTCTGAAGATATAGTTCAAGTTTTAGAAGAAAATATGGGAACTAGTTCTATTGAAATCATACATCTGGATTTCCCCTTCATGCAAGAAGTAGAATGGGATGGAAAGGCCTTCAAGAAGATGAAAAAACTCAAAACACTTATTATTAAAAAATGTCATTTCTCCAAAGCTCCCATTCATCTTCCTAATAGTTTAAGAGTGTTGGAATGGTGGAGATATCCTTCAGAAGAGTTACCATCCGACTTTCATGCAAAGAAACTCGCCATATTGAAGCCGGCCAAGTTACTTAAGGAAAGTGGGCGGACCTTACCGAAGGTTCCTGAAGTTCCACGGGATTATCTGAGGGTTTCTCCACTGACGTTGCGTATTTTGCAAAGAGTATTTCTAGGGGAGAAGGCATGGAGACCTTTTGACCTATTGCAGGCTTTACCAAGCTTTCTTGAAGTTTTGCAGACTTCTCAGAGGGTTCCTCAACTTACGTTGCACACTTGGCTTTTTCAAACCAAGACAGTGTGGAGACATTTTGTCCTTTTGCACGCTCTAGAGAGTGTTCCTGTAATTTTGCAGACTTCTCAGGTGGTTCCTAATGTTAATTTGCAGACTTCACAGAGGATTTTTCAAGTTGAGACGGTGTGTACACATGTTGGTTTGCAGACTTCAGTGAGCATTCCCGGAGTTATACCAACTTTTGTCATGGTTCCTGAAGTTATGTTGCAGACTTCAATGCGAGCTGAGATGGTGTGGAGACTTGTTGGCCTTGCATCAACTGTAGTTGGCCTGTTTTGTCATGCACTGAGCCCTTCTCTCAAACGTTTAATTGGTGGATGGAACTTTTTCAAGCTCTTTCTTTACTGTGTGCTATCCTTTGTTGTCTGTGTAACCATATTGTTTGCCAAGCAGTTCTCACTCTTACGGAAGCCAGGTCAGCTTAAAAACTATGTGATCTTTGCAGTTTTGATGATCATGTCAGTGTACTCATTCTTATATGACAAAGCTGTGGACGGGAAACCAGAAATAAAGAGCTTGGTTTCTAATGCTGCCTTTGCTTTAGTGTCACTGAGCTTGTCCAAACTGGTTAAATCTGGATATGAGATTGGTATATTCGCTTATTTCCTGACCTGCTTTACCATTCAACTGGTGACCATTAACTGGGCGCTTATTTTGGTTGCCATAATCTTTGGTTGTCCACTCTTTGTTATGCATTCCTCTTCACATTCCACCCAAAATGATGGTGATGGAGGTCATGTTATTCCTTTCTCTTTGGATTCCCGACCAAATGTTGGACGTGGTGGTCAACATCATGTCGTAGACATGCCACGTGAAGAAAGGGAATTACAGCAAAGAACAAACAGTTTAAGAAGTTCTGTAGCATTGTAG 2502 0.4117 MYDCDECGIALHKLLLLGRDGDEREFIERIVKVVSSRINRLPLYVADYPVGLESRLQEVCSFLDVGSDHRVLTVGIWGMGGIGKTTLARAVSNLVGDHFEGLSYLDNVREVSSKHGLVHLQKKLLLDMLGKKDFLFESVYEGASVIKTMIHRKKVLLIVDDVDSIEQLRALVGGPEWFGSGSRVIITTRDKHLLVHQGADKIYEARELNFTESLELLRWNAFRYGNVDPSYTEVLNQVVAYASGHPLALEVIGSNMFKKSVAEWTSALNRLKRIPHKGIQSMLKVSYDYLGEDEKRVFLDIACCFKGYDLTEVEDILRAHHGYNMKHHIGVLIEKSLLSVSSDGKVTLHPLLEDMGKEIVRQESPAEPGRRSRLWFSEDIVQVLEENMGTSSIEIIHLDFPFMQEVEWDGKAFKKMKKLKTLIIKKCHFSKAPIHLPNSLRVLEWWRYPSEELPSDFHAKKLAILKPAKLLKESGRTLPKVPEVPRDYLRVSPLTLRILQRVFLGEKAWRPFDLLQALPSFLEVLQTSQRVPQLTLHTWLFQTKTVWRHFVLLHALESVPVILQTSQVVPNVNLQTSQRIFQVETVCTHVGLQTSVSIPGVIPTFVMVPEVMLQTSMRAEMVWRLVGLASTVVGLFCHALSPSLKRLIGGWNFFKLFLYCVLSFVVCVTILFAKQFSLLRKPGQLKNYVIFAVLMIMSVYSFLYDKAVDGKPEIKSLVSNAAFALVSLSLSKLVKSGYEIGIFAYFLTCFTIQLVTINWALILVAIIFGCPLFVMHSSSHSTQNDGDGGHVIPFSLDSRPNVGRGGQHHVVDMPREERELQQRTNSLRSSVAL* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2373 833 MobiDBLite consensus disorder prediction 796 833 - -
Lja2g2373 833 Gene3D - 33 201 IPR027417 -
Lja2g2373 833 Gene3D - 207 291 IPR042197 -
Lja2g2373 833 SMART AAA_5 70 209 IPR003593 -
Lja2g2373 833 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 581 IPR044974 GO:0006952
Lja2g2373 833 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 301 IPR027417 -
Lja2g2373 833 PRINTS Disease resistance protein signature 149 163 - -
Lja2g2373 833 PRINTS Disease resistance protein signature 242 256 - -
Lja2g2373 833 PRINTS Disease resistance protein signature 73 88 - -
Lja2g2373 833 PRINTS Disease resistance protein signature 414 430 - -
Lja2g2373 833 SUPERFAMILY "Winged helix" DNA-binding domain 279 385 IPR036390 -
Lja2g2373 833 MobiDBLite consensus disorder prediction 809 823 - -
Lja2g2373 833 PANTHER ARCHAEAL ATPASE 20 581 - -
Lja2g2373 833 CDD AAA 50 190 - -
Lja2g2373 833 Pfam NB-ARC domain 54 289 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2373 Lja-Chr2 28725237 28730212 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2373 50 457 WRKY Transcription Factor Family AT5G45050 32.500 1.00e-49 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2373 - - lja:Lj0g3v0302489.1 1548.1