Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2369 ATGGGATTTGAATCTAATGAAAGAAGTTCCTGGTGGCAATTCTGCTTCTGTGCTTTAATCAACTCATTCACCTTCGACGTGTTCCTCAGCTTCAGAGGCTCCGACACACGCCACGGTTTCATCGGCTTTCTCTACAAATCTCTTCTTGACAAGGGAATCCGCACCTTCATCGACGACGAGGAGCTTCAGAGAGGAGATGAAATCACACCGTCACTCGTCAAAGCCATTGAACGGTCCAGAATCGCCATTCCAGTGTTCTCTAACAGCTATGCTTCTTCTTCGTTTTGCTTAGATGAACTTGCCAAGATTTTTGAGTGTTTTAAGAAGAAGGGCAGGTTGGTTTTGCCTGTTTTTTATGATGTGAATCCTTCTGATGTGCGGTGCGGCGAGACCGGGAGTTATGGAGTAGCTCTGGCTATGCATGAAGAGAGGTTTAGAAATATGAAGGAGAGTTTTGAGGATAACATGGAGAGGTTGAAGAAATGGAAGGTTGCTCTTAAGCAAGCTGCTAACTTGTCTGGTTGGCAAATCAAACTTGGGAATGAATATGAACATGAGTTTATTGGGAAGATAGTTAGAGAGGTCTCGAACAAGATCAATCGCACTCCTTTGCATGTTGCGGATTACCCGGTTGGATTGGAGCGTCGAGTGCTAGCGGTGAAGTCGCTTTTGGATGTTGGATCTGATGATGGAGTCCACCTGGTAGGGATCTATGGAATTGGTGGGATGGGTAAAACAACACTTGCTCGAGCGGTTTATAATTTGATTGCTGACCTATTTGAAGGTTTGTGTTTTCTTGACGATGTGAGAGAAAAGTCGGCCAAACATGGATTGGTACATCTCCAAGAGTTGCTTCTTTCTGAAATAGTTGGAGAGAAGGATATTAAGATAGGAAGTGTCAGTAAAGGGATTTCAATAATAAAGCATAGGCTCCACCAAAAGAAGATTCTTTTAATTCTTGATGATGTTGACAAACTGGAACAGTTGCGGGCTATTGTTGGAGGGCCTGACTGGTTTGGTTCTGGTAGCAGAGTCATCATAACAACTCGAGACAAACATTTGCTAGCAAGTCATGGGGTTGAGAGAAAATATGAGGTAGATGATTTAAATGAAGGAGAAGCACTTGAATTGCTTAGTTGGAATGCTTTTAAAAAAGACAAAGTTGATCCAAGTTACAAGAACATTTTAAACCAAGTAGTATCTTATGCTTCTGGCCTTCCATTGGCTTTGGAAGTAGTAGGTTCCCTCTTGTTTGGGAAAAGCATAAAAGAGTGGGAATCTGCATTAACACAGTATAAAAAAATTCCTAATAAAAAGATTCAAGATATACTTAAGGTAACTTATAGTGCTTTAGAGGAAGACCATCAGAAAATTTTTCTTGACATTGTTTGTTGCTTGAAAGGTTACAGATTGGGAGAGGTTGAAGATATACTTTGCGCTCATTATAGTGTCTGCATGAAATATGGTATTGGGGTGTTGGTTGATAAATGTCTCCTAAAGATTAAGAATGGTTGGGTGACATTTCATGAATTGATAGAAGTTATGGGTAAAGAAATTGATCGACAGGAATCACCAAAAGAGCTTGGGAAACATAGAAGGTTATGGTTCCATGAAGATATTGTTCAAGTGTTGGCAGAAAATACGGGAACTAGTGAGATTGAAATCATATATCTGGATTTCCCCTTATTGGAAGAAGATGAAGAAGTATTAGTAGAATGGGATGGAGAGGCCTTCAAGAAGATGGAAAATCTCAAAACTCTGATTATTAAAAATTGTCATTTTTCCCAAGCTCCCAAGAACCTTCCAAATAGTTTAAGAGTATTGGAGTGGTGGACATATCCTTTACAGGATTTACCATCTGATTTTCATCCAAAGAATCTTGCCATATGCAAGTTACCCGAAAGTTGCTTTATGTCACTCGAGTTGTCTGGCTTAATAAAGAAGTTCGTGAATCTAAGAGTCTTGAATTTTGACGGAACTGAATGTTTAACACAGATACCTGATGTATCTGGTCTCCCAAATTTAGAAAAATTGTCATTTGAATGTTGTGAGAATTTAGTTACAATTCATGATTCAGTTGGGTTCCTGGATAAACTTAAACTCTTGAGTGCTTTTGGTTGTACCAAGCTTAGGAGTTTTCCTCCCATCAAGTTGAGCTCGCTTGAAGAATTGGAACTTTCATCTTGCTCAAGTCTTGAGAGTTTTCCAGAAATATTAGGAAAGATGGAAAATATTACACGGCTTGAGTTGAAACACACTTCGATAAAAGAATTGCCATTTTCATTCAGAAATCTTACCCGGCTTCGAGATATTGCACTGCTTGACTGTGGAAATGTTCAGTTACCAAGTAGTATTGTGATGTTGCCAGAACTGGCTGAGATTTTTGCAGTGGAATGCAAAGGGTGGCTATTGCCAAATAAGGACAAGGATGAAGAAAAAGTGAACTCGATGTCTTCAAATGTAAAATGTCTTTGTCTCTCGGGCTGCAATCTGACAGATGAATATTTTCCCATACTTTTTGCGTGGTTTCCTAATGTGAGAGAGTTAGAGCTATCCAGCAATAATTTCACATTCCTTCCTGAATGCATACAAGAATATCGCTCTTTGAGGGTGCTCGATTTGGATAACTGTCAGTGCCTTCAAGAAATTAAAGGGATTCCGCCAACTTTGGAATATTTCTCTGCAGGAAACTGCAAATCCTTGACTTTTGGATGTACAGACATGTTACTGAATCAGGAATTGCATGAGGCTGCAAATACCATGTTTTGTTTGCCAGGAGCAAGCATACCTGAGTGGTTCAACCACCACAGCATGGGACCTTCAATTTCTTTCTGGTTCCGTAACAAGTTCCCTGCCATAGCTCTCTGTTTTGTTGTTGGACCGATGGGCAAGGACTCAATTTTGTTTGGACCCATCGTGACTGTCAATGGCAATGCAATTAAGATGAAGTTATTAACAGAGAAAAGGTTCTGTTTTGACTTCTCAGCATTAACTGATCATATACTTATCATCGGTACAAGATACATGATATTCGAAGATAATCTGGATAATGTACTTTCAGAAAATGAATGGAATAATGTGGTGGTTTCTATTGGTATTGACTTTGAATCTAGCTCAAAGGAAATAGCTGTCAAGGAAACGGGAATCCATGTAATCAAACAAGAATGTAACATAGGTGATATCCGATTCAAGAGTCCTTATGATGAACCCTTTCTGAAAGAGAAGGATAGATTGGTGAACATAGGAGATTCTCATAGACAAATTATGCAGCAGCAAACAAGTTCAGTTTTTTTGGAACCGCATGTAGGATGGGATAGAGAGTCACTTTCTTCGCTTCCATCTTCTGCATTTAACGATAATGTTAATTGGGATTCAAACTCAACAAGCATGAGTAGCACCACCGCTGTCCAAGGCCATGAAATTAGGTCACATAAGAGAAAAAAGGGTGAATTAAGGTTGAACACAGGAGTTTTACAATTTGTGCAGCAGCGAAAAAGAATGGCTTCAATGGGTTTAGTGCTACGACAGGGTAGGGCTTCACCAGGTTTATTGAAACGGCGGGGCAAAGAGCGGCTTTCATTACTTCCTCCTCCAACATTCAATGATAATATGGATTGGGATTCAAATTTAACACAGATGAGTGGCATCACCAGTGTCCGAGGTTTGCAAGAGCAACATGTACCTTACGCTACCAAACATAATTTTGAAGGCTGTGAAAGTGTAAATGAAGCTGAAGGAAAGGAAATTGAAGAATGCAACAGTTATGATGGAGAGGTCAATGGCAGGAGCCCAGTAATGGAGCAGCTATCAATGACTCAGGAGGATCAAGTGACTTGCGAGAAATACCAACCTGCCTCAAGTAGGGCTTGGGATCCAATGGAATTAGAATATCAAGTATCCAGAAAACCAATTTGA 3915 0.3992 MGFESNERSSWWQFCFCALINSFTFDVFLSFRGSDTRHGFIGFLYKSLLDKGIRTFIDDEELQRGDEITPSLVKAIERSRIAIPVFSNSYASSSFCLDELAKIFECFKKKGRLVLPVFYDVNPSDVRCGETGSYGVALAMHEERFRNMKESFEDNMERLKKWKVALKQAANLSGWQIKLGNEYEHEFIGKIVREVSNKINRTPLHVADYPVGLERRVLAVKSLLDVGSDDGVHLVGIYGIGGMGKTTLARAVYNLIADLFEGLCFLDDVREKSAKHGLVHLQELLLSEIVGEKDIKIGSVSKGISIIKHRLHQKKILLILDDVDKLEQLRAIVGGPDWFGSGSRVIITTRDKHLLASHGVERKYEVDDLNEGEALELLSWNAFKKDKVDPSYKNILNQVVSYASGLPLALEVVGSLLFGKSIKEWESALTQYKKIPNKKIQDILKVTYSALEEDHQKIFLDIVCCLKGYRLGEVEDILCAHYSVCMKYGIGVLVDKCLLKIKNGWVTFHELIEVMGKEIDRQESPKELGKHRRLWFHEDIVQVLAENTGTSEIEIIYLDFPLLEEDEEVLVEWDGEAFKKMENLKTLIIKNCHFSQAPKNLPNSLRVLEWWTYPLQDLPSDFHPKNLAICKLPESCFMSLELSGLIKKFVNLRVLNFDGTECLTQIPDVSGLPNLEKLSFECCENLVTIHDSVGFLDKLKLLSAFGCTKLRSFPPIKLSSLEELELSSCSSLESFPEILGKMENITRLELKHTSIKELPFSFRNLTRLRDIALLDCGNVQLPSSIVMLPELAEIFAVECKGWLLPNKDKDEEKVNSMSSNVKCLCLSGCNLTDEYFPILFAWFPNVRELELSSNNFTFLPECIQEYRSLRVLDLDNCQCLQEIKGIPPTLEYFSAGNCKSLTFGCTDMLLNQELHEAANTMFCLPGASIPEWFNHHSMGPSISFWFRNKFPAIALCFVVGPMGKDSILFGPIVTVNGNAIKMKLLTEKRFCFDFSALTDHILIIGTRYMIFEDNLDNVLSENEWNNVVVSIGIDFESSSKEIAVKETGIHVIKQECNIGDIRFKSPYDEPFLKEKDRLVNIGDSHRQIMQQQTSSVFLEPHVGWDRESLSSLPSSAFNDNVNWDSNSTSMSSTTAVQGHEIRSHKRKKGELRLNTGVLQFVQQRKRMASMGLVLRQGRASPGLLKRRGKERLSLLPPPTFNDNMDWDSNLTQMSGITSVRGLQEQHVPYATKHNFEGCESVNEAEGKEIEECNSYDGEVNGRSPVMEQLSMTQEDQVTCEKYQPASSRAWDPMELEYQVSRKPI* 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2369 1304 Gene3D Ribonuclease Inhibitor 567 920 IPR032675 -
Lja2g2369 1304 MobiDBLite consensus disorder prediction 1127 1146 - -
Lja2g2369 1304 PANTHER ARCHAEAL ATPASE 35 1031 - -
Lja2g2369 1304 SUPERFAMILY "Winged helix" DNA-binding domain 438 544 IPR036390 -
Lja2g2369 1304 CDD AAA 211 351 - -
Lja2g2369 1304 Gene3D - 20 197 IPR035897 -
Lja2g2369 1304 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 1031 IPR044974 GO:0006952
Lja2g2369 1304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 462 IPR027417 -
Lja2g2369 1304 PRINTS Disease resistance protein signature 234 249 - -
Lja2g2369 1304 PRINTS Disease resistance protein signature 716 732 - -
Lja2g2369 1304 PRINTS Disease resistance protein signature 310 324 - -
Lja2g2369 1304 PRINTS Disease resistance protein signature 403 417 - -
Lja2g2369 1304 SUPERFAMILY L domain-like 569 903 - -
Lja2g2369 1304 SMART till_3 24 172 IPR000157 GO:0007165
Lja2g2369 1304 Pfam C-JID domain 924 1052 IPR045344 -
Lja2g2369 1304 Gene3D - 198 362 IPR027417 -
Lja2g2369 1304 Pfam NB-ARC domain 217 438 IPR002182 GO:0043531
Lja2g2369 1304 Pfam TIR domain 25 203 IPR000157 GO:0007165
Lja2g2369 1304 Gene3D - 368 452 IPR042197 -
Lja2g2369 1304 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 175 IPR035897 -
Lja2g2369 1304 ProSiteProfiles TIR domain profile. 23 199 IPR000157 GO:0007165
Lja2g2369 1304 SMART AAA_5 231 370 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2369 Lja-Chr2 28632900 28652420 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2369 21 799 WRKY Transcription Factor Family AT4G12020 30.521 8.01e-78 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2369 - - gmx:100814962 1807.34