Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2357 ATGGAGCCAAACTTGATCGGAGCTGCGCCACAAACGGTGGAGCAGAATGAACAAATGTCAGAGTTGTGGTCCCATCATCAAGGGGCTGAAAACACATTCTATATTGCTGAAGACTTTGACATGAACATGCTTTGGAACGAGGTTGAGCACTTTGATATCCCGGACTTTCCATCCCCTCCGCCACCACCATCAACTGTCGATATGGGAATGGTTAGCACCGGAGTGGAGCCAAACTTGATTGGAGCTACGCCACAGACGGTGGAGGAGAATGAACAAACGTCAGAGTTGTTGTCCCATCATCAGAGGGCTTTATCTGAAAACACATTCTATATTGCTGAAGACTTTGACATGGCCATGCTTTGGAACGAGTCTGAGGACTTTGATATCCCAGACTTTCCATCCCCTCCGCCACCACCATCAACTGTCAAGACGACTGTCGATATCGGAATGGTTAGCACCGGAGTGGTAGACGGTGGGCAGAGTGGTGGTGGTGAGAAAGGTGTCAAGCAACGTCATCAGCGCAATTTTTCTGTTGACATGCTCTCCACAGTGTCATTTCAGGGTGCCTCGTCTTCTACAAGGGGGAGGACAAGGACCCTGACTCCTGAGCGATTGGCAGCAATTGCTCTAGTCGATCCAAAGAAAGCCAAGAGGATTCTTTGTTGTCGGAGATCCGCTGATAAAAGAAAGGAGAAGAAAAAGCAACATCAAAGTGAGCTGGAAAAACAGGGTAAGGAGCTTGAGATACAAGCAAGCAACCTCTCTGCACGTGTTGCCCAACTAAAGAAAGAAACCGCAGAAATGGCTACTAAAAAAAAGGAGCTAGAAATACAAATACAAGGCATGACTAAGACTTATCAACTTCAGAGAGTTCTCAAGCAGAAGACAGAGGAAGAAATGGATCTCCTCAGGATTCAAACTGCTCAGAATGCTGCTATTATTGACAATCATTCTTATAATGGTTTGGTCTCTCAGTTTTCTTCCCAATTAGCTATGAATCAGGTTCATCATTATCTACCACCCCAACTCCAGGTTCCTCAGCGACCACATCTCTTCATGCCAATGTCGATGCCACCGCCTCCTCCACCTCCTCAGCAACCGCAACTCTTCATGCCTCCATCTCCTCCTCAGCAACCACACATCTTCATGCCACTGCCGTCTCCTTCTTCACCTCCCTCTGGTCATCCTTTCAATGGTGAATTTGGCCCTGACTTCTCAAACTACAATGAGGAGCTAGCTGATAATAGCAACAGAAAGTGA 1260 0.4706 MEPNLIGAAPQTVEQNEQMSELWSHHQGAENTFYIAEDFDMNMLWNEVEHFDIPDFPSPPPPPSTVDMGMVSTGVEPNLIGATPQTVEENEQTSELLSHHQRALSENTFYIAEDFDMAMLWNESEDFDIPDFPSPPPPPSTVKTTVDIGMVSTGVVDGGQSGGGEKGVKQRHQRNFSVDMLSTVSFQGASSSTRGRTRTLTPERLAAIALVDPKKAKRILCCRRSADKRKEKKKQHQSELEKQGKELEIQASNLSARVAQLKKETAEMATKKKELEIQIQGMTKTYQLQRVLKQKTEEEMDLLRIQTAQNAAIIDNHSYNGLVSQFSSQLAMNQVHHYLPPQLQVPQRPHLFMPMSMPPPPPPPQQPQLFMPPSPPQQPHIFMPLPSPSSPPSGHPFNGEFGPDFSNYNEELADNSNRK* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2357 419 CDD bZIP_plant_RF2 215 266 IPR044759 GO:0003700|GO:0006355
Lja2g2357 419 Coils Coil 223 278 - -
Lja2g2357 419 MobiDBLite consensus disorder prediction 224 244 - -
Lja2g2357 419 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 91 351 - -
Lja2g2357 419 MobiDBLite consensus disorder prediction 357 393 - -
Lja2g2357 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 212 275 IPR004827 GO:0003700|GO:0006355
Lja2g2357 419 MobiDBLite consensus disorder prediction 357 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2357 Lja-Chr2 28446475 28448682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2357 97 351 bZIP Transcription Factor Family AT1G43700 29.260 2.84e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2357 K20557 - gmx:778142 139.428