Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2346 ATGGCTTACAGACGCTGCCTCTTGACAAGAGGGAACCTCATAAACCGGAGCTGCCACCCGTCTTTCAGCTACGTGCTCCACAGCAATGAAGGGAAGCAGCAAGATGAGAAACCGTCCCCGACGAACGTTGGCAACTTCATTCAAACGAGGTCTTTTGGGAACTACCTTAATGGATCAACAGGGTTTCTCGCGGCGGCGGCGTCACCGTACGCTGGGTACAATCTCTGCCGGTACATGTCGACGGTGAATCAGGGTTCAAACGAGATTGGTGTAATGAGTGATGTGGCGGATGTTCTCACTGATGCGACCGTGGAGGGTGTAGCTTCTCAGGCTCCTGTTGCCAGTGAAGTTGCCATTGCTGCTGCTGATTCTTTTTTGCCTGTACAAATCTTGCAGTATGTGATAGATGCTGTGCATTCCTACACTGGCTTAAACTGGTGGGCAGCCATAGTTCTAACAACTCTTGTGATTCGAAGTGCGACTGCTCCCCTCTTAATAAATCAACTTAAGGCCACTTCTAAGCTTACAATAATGAGACCACACTTGGAAGAGATAAAACAACAGATGGAAGGGAAGACTGGGGATCCAGAGGCTATTGCTGAAGGTCAGAAGCAGATGCAAAAGCTATTCAAGAAATATGGTGTGAGTCCATTTACGCCATTGAAGGGAATCTTTATTTCAGGTCCTATCTTTATTAGTTTTTTTCTTGCGATATCAAACATGGCTGAGAAAATGCCATCGTTCAAGCATGGTGGAGCTTCCTGGTTTACTGATCTCACAACTCCAGATACCTTATACATTTTGCCGGCTTTAACTGCGTTGTCATTCTTAGTAACAGTAGAGTGTAATATGCAAGAAGGAATGGAAGGAAATCCTGTGGCTAGCACCATGAAAAATGTCTCTAGGGGTATTGCTGTTCTTACCGTTCCTCTCACCATGGGATTTCCAAAGGCTATATTTTGTTACTGGATTACGTCAAATTTGTTTTCATTGAGTTATGGACTTGTGCTTAAAGCTCCTGGTGTAAAGAAAGCTTTGGGTGTTCCTGAAATTCCTGCTGCATCACCGACCAGTCCTCCACAATCTCCCTTTTCTATATTTCCAGCACTAAAAAAAGCTACAACAGCGACAAATGTGGCGAGCTCAGTGCCAGTTGAATCATCAGCTGAAGTTGAATCATCAAAATCTTCAAATAAAAAGATTTCTTCTTCTTCTGTTATCAGTCAAAGGCTTAGAAGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAAAGTAAGAAGTAA 1281 0.4387 MAYRRCLLTRGNLINRSCHPSFSYVLHSNEGKQQDEKPSPTNVGNFIQTRSFGNYLNGSTGFLAAAASPYAGYNLCRYMSTVNQGSNEIGVMSDVADVLTDATVEGVASQAPVASEVAIAAADSFLPVQILQYVIDAVHSYTGLNWWAAIVLTTLVIRSATAPLLINQLKATSKLTIMRPHLEEIKQQMEGKTGDPEAIAEGQKQMQKLFKKYGVSPFTPLKGIFISGPIFISFFLAISNMAEKMPSFKHGGASWFTDLTTPDTLYILPALTALSFLVTVECNMQEGMEGNPVASTMKNVSRGIAVLTVPLTMGFPKAIFCYWITSNLFSLSYGLVLKAPGVKKALGVPEIPAASPTSPPQSPFSIFPALKKATTATNVASSVPVESSAEVESSKSSNKKISSSSVISQRLRSLEKQVKGRKKSKK* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2346 426 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 145 332 IPR028055 -
Lja2g2346 426 Coils Coil 411 426 - -
Lja2g2346 426 MobiDBLite consensus disorder prediction 381 426 - -
Lja2g2346 426 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 69 400 - -
Lja2g2346 426 MobiDBLite consensus disorder prediction 381 412 - -
Lja2g2346 426 PANTHER OXA1 69 400 IPR001708 GO:0016021|GO:0032977
Lja2g2346 426 Pfam 60Kd inner membrane protein 146 334 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2346 Lja-Chr2 28298255 28307985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2346 126 344 Chloroplast and Mitochondria Gene Families AT2G28800 25.664 1.69e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2346 K03217 - gmx:100817052 593.578