Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2333 ATGGCTTTGCTACCATCATCCTCCTCCTCCTCTTCCATCACCTATGCATTCACATTTGATGTGTTCATCAGCTTCAGGGGTTTTGATACCCGCTATGGTTTTACCGGCAATCTCTACAAAGCTCTAACTGATAAGGGAATTCACACCTTCATTGATGATGAGGAGCTTCACAAAGGGGACGAAATCACACCATCACTTGAGAAGGCCATTGAAAAGTCCAGGATTTTCATTGTTGTCCTCTCTAAGGACTATACATCATCCTCGTTTTGCTTAGATGAACTTTCCAAGATTCTTGACTGCTCTCAGAAAGAGGGTCGTCTGGTTTGGCCAGTATTTTATGATGTGGATCCTTCTGATGTGCGGAAGCAAACTGGGAAGTTCGGAGAAGCAATGGTCCTGCATATGGAGAGGTTCAAAGACAACAAGGACAAGTTGCAAAAATGGAGGATAGCTCTACAAAGAGTGGCTAACTTCTCGGGTTGGCATTTCAAGCATGGAGATGCATATGAACACGAGTTTATCGGAAAGATTGTTAATGAAGTCTCAAGAAAGATTAATCGTGTTGCTTTACCTATTGCTGATTACCCGATTGGACTAGAGTCACAAGTGCGACATGTAGTTTCGCTTTTGGATGTTGGGTCTATTGATAGAGTTCACATGGTAGGGATCCATGGAATAGGTGGAATTGGTAAAACAACACTTGCTCTAGCAGTTTACAATTCCATTGCTGACCATTTTGAAGGTTTATGTTTTTTGGAGAATGTTAGAGAAAATTCAAACAAACATGGGTTACTACATATCCAAAAGACCCTTCTTTTGGCTGTCCTTGGAGGGAAGGAAATTGAGATAACAAGTGTCAAGCATGGAAGTTCAATAATACAACATCGGCTCCAACAAAAAATGGTTCTTCTGATTCTAGATGATGTTGACAAGGAGGAGCAATTAAATCATGTTATTGGAAGACCTAATTGGCTTGGTCCTGGTAGTAGAGTCATCATCACGACTCGAAACCAACAATTGCTAGCATGCCATGGGGTTGAAAGAACATTCAAAGTGAAAGAGTTGAAGAAGGAACATGCTACCGAATTGTTCAAGTGGAAAGCTTTTAAAAACCAGGAAGTTAATTCAAGTTATGAGGACTTACTGAACCAAGCATTGAGTTACACTTCCGGCCTTCCATTAGCTTTGGAAGTAATAAGTTCTAACTTGTTTGGTAAAACAAGGGAAGAATGGGAATCGACATTAGAACAATATAGAAGGATTCCACCTAGAGACATCCAAAAGATACTTGAAGTGAGCTTTGATTCTTTGGAGGAAGAAGAGAAGAATGTTTTCCTAGACATTGCTTGTTGCTTCAAAGGATATAAGTTGGAAGAGTTCAAGGACATACTTTCTGCTCATTATGGTTTCTCCATAGCAAATCACATTAGAGTGTTGGTTCAAAAGTCTCTCATAAAGAATACTAGTTTGACTGAAAAAGTGACACTACATGACTTAATTGAGGATATGGGTAAAGAAATTGTGCAACAAGAATCACCAAAAGAACCTGGAAACCGCAGTAGGCTATGGTCTCTTGAAGATATATTTGAAGTTTTGGAAGAAAATACGGGAACTAGCAAAATTGAAATGATACATCTAGATTTCCCGTCATCTGAAGACGTGGATTGGGATGGAGAGGCTTTCAAGAAGATGAAAAAACTCAAAACACTTATTATTAGAAAAAATCATTTTTCTAAAGGTCCAGAGCATCTTCCAAATAGTTTAAGAGTATTAGAGTGGTGGAAATATCCTTCACAACGTTTACCAAGTGACTTTTATCCAAAGAAACTCTCCATATGCAAATTACTTGAGAGTAGCTTGGTGTCCTTTGAGTTGCTAAGATCATCAAAGAAGTTCGTGACTATGAAAGTTTTAAATCTCAATCGGTGTGCATCATTAACACATATACCTAACCTATCTGGTCTCCCAAATTTAGAAGAGTTTTCATTTGCACATTGTTCAAAATTAATTACTATTGACTGTTCCGTTGGGTTGTTGGACAAGCTTAAAATCTTGGATGCTGATTATTGCTCCCAGCTTAGGAGTTTTCCTCCCCTTAAGCTGCCCTCTCTTAAAGAACTCAAGCTTAGATGTTGTTCAAGTCTTGAGAGTTTTCCAGAAATATTGGAACAGATGAAAAATATATACGAACTTGATTTGGGTTGCACTAACATAAGCAAATTTCCACATTCAGTTGAAAATCTTACTCGACTTGATGCAATGACAGTTTATCACTTGCTTCCATCAAGGAGCTTAGTCACGATGCCACAACTAGTATGGCTCAAAATCAGGCAGCAGTGGATATTAGAAGAGGAGGACGAGAGTGAGAGTGAAGAAGAAGTGATGGATGGTGGAGCTATGGCATTAGTTCCCACGTTGTTTCCTAACTTGAATGAAAGAGAGAGTTCCATTCTTTTGCCTTCAAAAGTAGAATATCTTACTCTCGAAAAGTGCGACCTGTCAGATGAATATTTAGTATCAGTTCCCTCGTTGTTTCCTAACTTGAAAGAGTTATGCCTAAAGCATTGTTCACTCACAACTGTACCTGAATGCATCAAAGAATGTCGCTTTTTATGGAGGCTTACCTTGGCTTATTGCGAGCAACTAAGAGAGATTTTTGAAGGGATTTTGCCAAGATTAACCTACTTATCTGTAAAAAAATGTCCATCCTTGAGTTCCAGTTGTAGAAGCATGTTGATGAGGCAGGAACTGCATGAGGCTGTAGACATTCGTCTTCATTTGCAAAACTTAGAAGGAGAAACGATTCCAGAGTGGTTTGAGTACCAGAACAAGGGTCGATCTCAGTCAGTTTCTTTCTGGTTTCGTAACAACTTCCCTTGCATCTTACTATGTATGCCTTCGCCAAATGTGCCTGGTCATAATTATTTATTTGTAGATTCCTTCATCAATGGCTATTCATGTGACCGTTTCCGAGTAGATTGGGGTCATACGTGTCTTAGTAGGCTACGCCTAACAGACAAGGATAAATATATAGTTATAGAAAATGGGTGGAACCATGTGGAGGTTATGACTGACAGTGGCTTAGATTGTGGAATTGGAATCCATGTATGGAAAGAGCAAAACACGAAGGATATCCGATTCACGAATCCTTTAGACTTGAACTTGGCACCACTTGAAGAGGATGATGTTAATACTGAGTTGACTCGTTTATAG 3213 0.3918 MALLPSSSSSSSITYAFTFDVFISFRGFDTRYGFTGNLYKALTDKGIHTFIDDEELHKGDEITPSLEKAIEKSRIFIVVLSKDYTSSSFCLDELSKILDCSQKEGRLVWPVFYDVDPSDVRKQTGKFGEAMVLHMERFKDNKDKLQKWRIALQRVANFSGWHFKHGDAYEHEFIGKIVNEVSRKINRVALPIADYPIGLESQVRHVVSLLDVGSIDRVHMVGIHGIGGIGKTTLALAVYNSIADHFEGLCFLENVRENSNKHGLLHIQKTLLLAVLGGKEIEITSVKHGSSIIQHRLQQKMVLLILDDVDKEEQLNHVIGRPNWLGPGSRVIITTRNQQLLACHGVERTFKVKELKKEHATELFKWKAFKNQEVNSSYEDLLNQALSYTSGLPLALEVISSNLFGKTREEWESTLEQYRRIPPRDIQKILEVSFDSLEEEEKNVFLDIACCFKGYKLEEFKDILSAHYGFSIANHIRVLVQKSLIKNTSLTEKVTLHDLIEDMGKEIVQQESPKEPGNRSRLWSLEDIFEVLEENTGTSKIEMIHLDFPSSEDVDWDGEAFKKMKKLKTLIIRKNHFSKGPEHLPNSLRVLEWWKYPSQRLPSDFYPKKLSICKLLESSLVSFELLRSSKKFVTMKVLNLNRCASLTHIPNLSGLPNLEEFSFAHCSKLITIDCSVGLLDKLKILDADYCSQLRSFPPLKLPSLKELKLRCCSSLESFPEILEQMKNIYELDLGCTNISKFPHSVENLTRLDAMTVYHLLPSRSLVTMPQLVWLKIRQQWILEEEDESESEEEVMDGGAMALVPTLFPNLNERESSILLPSKVEYLTLEKCDLSDEYLVSVPSLFPNLKELCLKHCSLTTVPECIKECRFLWRLTLAYCEQLREIFEGILPRLTYLSVKKCPSLSSSCRSMLMRQELHEAVDIRLHLQNLEGETIPEWFEYQNKGRSQSVSFWFRNNFPCILLCMPSPNVPGHNYLFVDSFINGYSCDRFRVDWGHTCLSRLRLTDKDKYIVIENGWNHVEVMTDSGLDCGIGIHVWKEQNTKDIRFTNPLDLNLAPLEEDDVNTELTRL* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2333 1070 ProSiteProfiles TIR domain profile. 17 185 IPR000157 GO:0007165
Lja2g2333 1070 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 161 IPR035897 -
Lja2g2333 1070 PANTHER ARCHAEAL ATPASE 29 1023 - -
Lja2g2333 1070 Pfam TIR domain 19 186 IPR000157 GO:0007165
Lja2g2333 1070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 448 IPR027417 -
Lja2g2333 1070 PRINTS Disease resistance protein signature 220 235 - -
Lja2g2333 1070 PRINTS Disease resistance protein signature 699 715 - -
Lja2g2333 1070 PRINTS Disease resistance protein signature 296 310 - -
Lja2g2333 1070 PRINTS Disease resistance protein signature 389 403 - -
Lja2g2333 1070 Gene3D - 183 348 IPR027417 -
Lja2g2333 1070 Pfam NB-ARC domain 201 433 IPR002182 GO:0043531
Lja2g2333 1070 Gene3D - 16 182 IPR035897 -
Lja2g2333 1070 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 1023 IPR044974 GO:0006952
Lja2g2333 1070 SUPERFAMILY L domain-like 496 912 - -
Lja2g2333 1070 Gene3D Ribonuclease Inhibitor 539 723 IPR032675 -
Lja2g2333 1070 Gene3D Ribonuclease Inhibitor 724 940 IPR032675 -
Lja2g2333 1070 SMART till_3 18 158 IPR000157 GO:0007165
Lja2g2333 1070 Gene3D - 354 438 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2333 Lja-Chr2 27966750 27970862 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2333 634 826 WRKY Transcription Factor Family AT4G12020 30.500 1.00e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2333 - - lja:Lj0g3v0247409.1 1375.53