Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2322 ATGATATGTCTGGATTCCCCATCATTTGAAGAAGTAGAGTGTGATGGCAATGCTTTCAAGAAGATGAAAAATCTTAGAACCCTTATTATTAAGAGAGCTCATTTTTCTGAAGGTCCGAAGTATCTTCCAAATAGTTTAAGAGTATTAGAGTGGTGGAAATATCCTTCAGAACATTTACCATATGATTTTCTTCCGAAGAAACTTTCCATTTGCAAGTTCCCTGGTAATTGCTTTACATCATTGGAATTGCTTAATTCATCAAAGGGGTTCGTGAATATAAAGATTTTAAATTTGGAAAAGTGTAAATATTTAACACACATACATGATGTATCTAGTCTCTCAAATTTAGAAGAATTTTCATTCAAGGGGTGTCACAATTTAATTACAATTCACTATTCTGTTGGACTGTTAAATAAACTTCAAATCTTGGATGCTAGTTATTGTCATAAGCTCAGGAGAGTTCCACCCCTCAAGTTGCCTTCACTTGACTTGCAAAACATTTACATAAGGAAATTTCCATCTTCATTTCAAAATTTGTGTCGACTTAAATTATTACATGTAAATCTCTTGTTGTCAATAAGGGGCTTTGCCACAATACCACAGCTGGCTTCGGTTGTGGTCATGGATGGTGGTGTAAGGGGGCCGCTATTGGAAATGAAGGATGAAGAATGTCTTTGTCTCCATGACATTAAGGGAGCAAATAAATGGCTGGCATTAGTTCTCCCGTACTTTGATAACTTGAAAGAATTAGACTTATCTCATAGTAATATCACAAGTGTTCCAGAGTGCATCAAAGAATGCCGCTATTTATGGAAGCTTGAAATGGTTTATTGCTATGAACTTCGAGAAATTAAAGCAATTCTGCCGAGCTTAAAATATTTATCAGCAGTAGGGTGCAAATCCTTGAATTCCTCGAGTAAAAGGATCTTACTGAAGCAGGAACTGCATGAGCCAGGAAACACCTTCTTTCGTTTTCCAAGCCCAGAATCACAGAGGGTTCCAGAGTGGTTCGAGCACCGAAGCAGGGGTCCATCTCCGTCACTTTCTTTCTGGTTTCGTAATAACTTCCCTGACATCATACTACTCTGTCTTGTTTCACTTTCTTCATATCCGGTTAGGGGTACTGACTCTTTTTATGGCATACGCATCACTGTCAATGGCAATGTATGTCATGTATGTAAATATTACAATAAAGTCGACCGAGTGGTGCCGGGTAATACATGTCTTCTTCACGTACACAAACCAGATTATTGTGGTCTGCATGTAGCTTGTACAGAAAATGTGTGGAACTATGCGGAGGTTATGGTGGAGGTACATAACTATGCTGAGCAAGTTATGTTAGATATTGGGATTGGGATCCATGTATTGAAAGAGAAAAGTTGCATGGATGATATTCGGTTCAATAATCCTAACTGTGAGGAAAATTTTGATTCTGATCCTGATTCGGATGAAAATAAAAGAGATGAGTCTTCCGATTATAAGACCCCACCATAG 1494 0.3788 MICLDSPSFEEVECDGNAFKKMKNLRTLIIKRAHFSEGPKYLPNSLRVLEWWKYPSEHLPYDFLPKKLSICKFPGNCFTSLELLNSSKGFVNIKILNLEKCKYLTHIHDVSSLSNLEEFSFKGCHNLITIHYSVGLLNKLQILDASYCHKLRRVPPLKLPSLDLQNIYIRKFPSSFQNLCRLKLLHVNLLLSIRGFATIPQLASVVVMDGGVRGPLLEMKDEECLCLHDIKGANKWLALVLPYFDNLKELDLSHSNITSVPECIKECRYLWKLEMVYCYELREIKAILPSLKYLSAVGCKSLNSSSKRILLKQELHEPGNTFFRFPSPESQRVPEWFEHRSRGPSPSLSFWFRNNFPDIILLCLVSLSSYPVRGTDSFYGIRITVNGNVCHVCKYYNKVDRVVPGNTCLLHVHKPDYCGLHVACTENVWNYAEVMVEVHNYAEQVMLDIGIGIHVLKEKSCMDDIRFNNPNCEENFDSDPDSDENKRDESSDYKTPP* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2322 497 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 399 IPR044974 GO:0006952
Lja2g2322 497 MobiDBLite consensus disorder prediction 480 497 - -
Lja2g2322 497 Gene3D Ribonuclease Inhibitor 4 158 IPR032675 -
Lja2g2322 497 Gene3D Ribonuclease Inhibitor 159 317 IPR032675 -
Lja2g2322 497 SUPERFAMILY L domain-like 15 306 - -
Lja2g2322 497 MobiDBLite consensus disorder prediction 473 497 - -
Lja2g2322 497 PANTHER NB-ARC DOMAIN PROTEIN 12 399 - -
Lja2g2322 497 ProSiteProfiles Leucine-rich repeat profile. 246 267 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2322 Lja-Chr2 27813786 27815506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2322 17 167 WRKY Transcription Factor Family AT4G12020 32.530 2.56e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2322 - - lja:Lj2g3v0620870.2 456.832