Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2302 ATGACATTTAGCTCTGAAGATGAGGTGACCAGGTATTACATGAATTATGCTCAATGTAAGGGGTTTCGAGTTTCTAAAATAAGTTCGAAAAATGGAGATGATGGGAGGAAGTATTTTACTCTTGGGTGTAATCATGCGAGGAAATATGTGACCCATCGGAAGAATGTTTCGAAGCCGAATCCTATTCCGAAAGAACAGTGTAAGGCTAGATTGAATGCGTGTATGTGTTCCGACGGTACGATTATTATTTCAAGAGTTGTTGTTGAGCATAATCATGAACTAGGTCCAACCACACAGCGATATTATAATCGCAGCAAGGTTTTGGGGACTCGTATGAAAAGGAGGTTAGAGCTTAATGATCAAGGTGGAACTAATGTAAGAAGCACCTTTCAATCATTAGTTGTTGAAGCGAATGGGTTTGAGAAAGAAGATGACACAAGATGGCTACAACTTGGGATAGGAGACTCTGAGGCAATTCAGAACTATTTTGTTAGAATGCAAAAGCAAGATAGTCGATTTTTTTATTTGATGGATGTGGATGATAGAAGTCGTTTACGAAATATATTCTGGGCCGATGCGAGATGTAGGGCTGCACATGAGTATTTTGGTCAAGTTATAACTTTTGACACTACATACATAACAAATAAATATCACATGCCTTTAGTTTCTTTTGTCGGAGTAAATCATCATGGTCAGTCCGTGTTGCTAGGTTGTGCTCTATTGTCAAGTGAGAGTACTAAGACTTTTATTTGGTTGTTTGCGACATGGTTGGAATGTATGTATGGACGTGCTCCAAATGCCATAATTACTAATCACAACAAAGCAATGAAAAATGCCATTGAGCTTGTCTTTCCAAATGCTCGTCGTGGATTGTGCTTGTGGCATTTAATGGAAAAGGTTCCAGAAAAGTTGGGTGTGCACTCTAGTTATGAGTCTATCAAAACATTGTTGCATGGCGTTGTGTATGATTCTTTGAGTCAAAGTGATTTCATGGAGAGGTGGGGAAAAATGATTGAAGATTATGAGTTACAAGATAATGAATGGTTGAAGGGGATATTTGATGAGCGGCATTGTTGGGCTCCTGTTTATGTGAGAGACTCATTTTGGGCTGGAATGTTAATAACACAACCAAGTGAAAGCTTGAACTCTTTTTTTGATGGGTATGTAAACTCAAAAACCACATTGAAGCAATTTTTTGAAAGGTATGACAATGCCTTGAGGGATCAAATTGAAAGAGAAAACATGGCTGATTTTTATTCATTTAATACAGTAATTGCTTGTATAAGTCATTTTGGCTTTGAGGCACAATTCCAAAAAGCATATACAAATGCAAAATTCAAGGAATTACAAGTAGAGGTTGCTTCTATGATGTATTGTAATACTTGCTTTGAGAGATTGGAGGGCTTAAAATCAATATTTTCTGTTGTAGAAAACAAGAAAGTATGTGACAAAATTGAAGATGTTGTGTTCAGTGTGTCATTCAATGAAGAAGACTTTGAATTGCATTGTTCATGTTGCTTATTTGAGTTTACAGGTATTTTATGTCGACATGTTCTTTGTGTGCTTAAGCTCATGGGTAAAACAGAGTCTGTGATACCTTATTATGTTTTGTCACATTGGAGAAAGGATATAAAGCGACGACATACACTTGTTAAATGTGGTTTTGATCATTTAGCTGGACATGCTGACTTGCAACGACTTGATAAAGTTTGTGATGCCTTTTATGAAGTTGCTTCTATGGGGATAAATACTGATGATGATTTGTTGAAGGTGATGAATTGGATAAAGGATTTGAAGATTAAGTTAACCTGTGAAGAAACATCTCCTAGGATGATCGAAGCATGA 1845 0.368 MTFSSEDEVTRYYMNYAQCKGFRVSKISSKNGDDGRKYFTLGCNHARKYVTHRKNVSKPNPIPKEQCKARLNACMCSDGTIIISRVVVEHNHELGPTTQRYYNRSKVLGTRMKRRLELNDQGGTNVRSTFQSLVVEANGFEKEDDTRWLQLGIGDSEAIQNYFVRMQKQDSRFFYLMDVDDRSRLRNIFWADARCRAAHEYFGQVITFDTTYITNKYHMPLVSFVGVNHHGQSVLLGCALLSSESTKTFIWLFATWLECMYGRAPNAIITNHNKAMKNAIELVFPNARRGLCLWHLMEKVPEKLGVHSSYESIKTLLHGVVYDSLSQSDFMERWGKMIEDYELQDNEWLKGIFDERHCWAPVYVRDSFWAGMLITQPSESLNSFFDGYVNSKTTLKQFFERYDNALRDQIERENMADFYSFNTVIACISHFGFEAQFQKAYTNAKFKELQVEVASMMYCNTCFERLEGLKSIFSVVENKKVCDKIEDVVFSVSFNEEDFELHCSCCLFEFTGILCRHVLCVLKLMGKTESVIPYYVLSHWRKDIKRRHTLVKCGFDHLAGHADLQRLDKVCDAFYEVASMGINTDDDLLKVMNWIKDLKIKLTCEETSPRMIEA* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2302 614 SMART 26again6 501 528 IPR006564 GO:0008270
Lja2g2302 614 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 590 IPR031052 GO:0006355
Lja2g2302 614 Pfam MULE transposase domain 205 298 IPR018289 -
Lja2g2302 614 ProSiteProfiles Zinc finger SWIM-type profile. 490 526 IPR007527 GO:0008270
Lja2g2302 614 Pfam SWIM zinc finger 499 522 IPR007527 GO:0008270
Lja2g2302 614 Pfam FAR1 DNA-binding domain 11 94 IPR004330 -
Lja2g2302 614 PANTHER OS03G0843700 PROTEIN 1 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2302 Lja-Chr2 27364105 27366409 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lja2g2302 MULE 1.1e-32 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2302 - - cam:101506732 870.152