Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2288 ATGGCCAGTTCTGAAAACAATGAGCATCCAACACTATTAGAAACTGAGGAACAATCATATGGTGAGCCCTTGCATACAAGATTCCAAAGACTTGCATCCAACACACAAAGTGCATCATGTTCTATCTCCATTGAGTCATATGAAAAAGAAACTAGTCTTGTGAAACAAAGGAGTGGAACTGGAAATCTTTTGCAACAGAGTATTTGTTTAACCGGAAACAAACCAGAGGAAAGCAACACAGGTTCGATTTACTCGGATAAAAACTATGATAGAAATAATGAAAAATTACTGAGATCTAGGCAAGTGGGAATTTGTAATGATCCTTGTTTCACCACATACGCAACTAACTCCAAGGCTTCTCACTCTCAGCTAGTTTATCCAAAAGCTTCGACTATTTCTGATTCGAAGTTCCATAATGCTTATGGAGATGCCAAAGGTTTTGCGAGAAATCATAATTCATTCTACTCTTATGTTCCTGGAGTCATGAACCCTCACACTAAGTTCATACAACAATGGAACAAGGTCTTGGCCATTTTTTGCTTGGTTGCAATTTTTGTGGATCCACTATTTTTCTTCTTACTCTATGTGCAACGGGATTTTAATTGTATTGCTATCAATTGGAGATTGACAAAAGCACTTGTTATAGTCAGAAGCATAAATGATTTTATATATTTCTTTAACATTCTTGTCCAGTTTAGGTTGGCTTATGTTTCTCCTGAGTCGAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCAAAGAAAATCGCTCTTCATTACCTGAAGGGTTATTTTTTTATTGACCTGTTTATTGTGTTTCCTCTTCCTCAGATAATGTTATTGTTGGTCCTACCAGAATCCATGAGGGGAGCAAATTATGCTAAGAACCTTCTGCGTGCGGTGATCCTAGTGCAATACATTCCCAGATTATTCAGGTTTCTTCCTCTGCTAATTGGACAGTCCCCAACAGGATTCATATTTGAGTCGGCCTGGGCGAATTTCATTATTAATCTTCTCATCTATATGCTTGCTAGCCATGTTGTTGGCTCTTGCTGGTACCTCTTTGGTCTGCAGAGGGTTAATCAGTGTTTTAGAAATGCCTGCCACAGTTCTAGTGTACCTGGATGCTTGAGATTCATTGATTGTGGGATTGACCATGATAGAAACTATCTCCAAGGCCCCAAATCAGAACAGTGGAACAACAATACAGATGCTATTGCTTGTTGGGGTTCCCCTTCCACTGGTTCTTTGGATTATGGGATCTATGGCAATGCTGTGCCTCTTACTACAAAAACAGACATGGTTACCAAATATGTATTTTCTCTATTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGTAATCTAACACCAAGCAATTTTGTGTGGGAAGTCCTTTTTACTATGGCCACCATTGGATTGGGACTCTTGCTATTTGCACTTCTCATTGGAAACATGCAGAATTTTCTTCAAGGTCTTGGACGGAGGAGACAAGAAATGCAACTTAGACGACGTGATTTTGAGCAATGGATGAGATACAGACGATTACCCGAAGATCTAAGAAGGAGAGTAAGGCAGGCTGAACGGTATACTTGGGCTGCGACACGGGGGGTGAATGAAGAAATGCTTATGGTGAATCTTCCAGAAGATCTCCAAAGAGACATTAGACGTCACCTCTTCAAATTTGTTAAGAAAGTTCGATTATTTTCCCTGATGGATGAGCCTATCTTAGATGCCATTTGCGAGAGACTAAAACAAACTACATACATACAAGGAAGTAGAGTTCTGAACAAGGGTGGTCTGGTAGAGAAGATGGTATTCGTGGCGCGTGGAAAATTGGAGAGCATTGGAGAAGATGGAACTAGAGTTCCATTATCTGAAGGTGACGTTTGTGGTGAAGAACTTCTGACATGGTATCTTGAGCATTCTTCTGTCAGCACAGATGGGAAAAAAATTAAACTTCCAGGACAAGGGTTGCTCAGCAGTAGAACAATAAAGTGTTTAACAAATGTGGAAGCATTTTCACTCCGGGCCGCAGACCTTAGAGAAGTCACACTTCTGTTCACAAGATTCTTGCACAGTCCTCGTGTTCAAGGAGCCTTGAGGTATGAATCACCATATTGGAGATCCCTTGCAGCAACACGCATTCAGGTTGCATGGAGATACAGGAAGAAACGTCAAAATCGCGCTCATTCGTCATTATCAGGTTGA 2211 0.408 MASSENNEHPTLLETEEQSYGEPLHTRFQRLASNTQSASCSISIESYEKETSLVKQRSGTGNLLQQSICLTGNKPEESNTGSIYSDKNYDRNNEKLLRSRQVGICNDPCFTTYATNSKASHSQLVYPKASTISDSKFHNAYGDAKGFARNHNSFYSYVPGVMNPHTKFIQQWNKVLAIFCLVAIFVDPLFFFLLYVQRDFNCIAINWRLTKALVIVRSINDFIYFFNILVQFRLAYVSPESRVVGAGDLVDHPKKIALHYLKGYFFIDLFIVFPLPQIMLLLVLPESMRGANYAKNLLRAVILVQYIPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIYMLASHVVGSCWYLFGLQRVNQCFRNACHSSSVPGCLRFIDCGIDHDRNYLQGPKSEQWNNNTDAIACWGSPSTGSLDYGIYGNAVPLTTKTDMVTKYVFSLFWGFQQISTLAGNLTPSNFVWEVLFTMATIGLGLLLFALLIGNMQNFLQGLGRRRQEMQLRRRDFEQWMRYRRLPEDLRRRVRQAERYTWAATRGVNEEMLMVNLPEDLQRDIRRHLFKFVKKVRLFSLMDEPILDAICERLKQTTYIQGSRVLNKGGLVEKMVFVARGKLESIGEDGTRVPLSEGDVCGEELLTWYLEHSSVSTDGKKIKLPGQGLLSSRTIKCLTNVEAFSLRAADLREVTLLFTRFLHSPRVQGALRYESPYWRSLAATRIQVAWRYRKKRQNRAHSSLSG* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2288 736 MobiDBLite consensus disorder prediction 1 20 - -
Lja2g2288 736 Gene3D Helix hairpin bin 495 560 - -
Lja2g2288 736 Gene3D Jelly Rolls 566 690 IPR014710 -
Lja2g2288 736 SUPERFAMILY Voltage-gated potassium channels 164 491 - -
Lja2g2288 736 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 46 730 - -
Lja2g2288 736 PANTHER CYCLIC NUCLEOTIDE-GATED CATION CHANNEL PROTEIN 46 730 - -
Lja2g2288 736 Pfam Ion transport protein 174 497 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lja2g2288 736 Gene3D - 165 492 - -
Lja2g2288 736 CDD CAP_ED 568 684 IPR000595 -
Lja2g2288 736 ProSiteProfiles cAMP/cGMP binding motif profile. 568 636 IPR000595 -
Lja2g2288 736 SUPERFAMILY cAMP-binding domain-like 495 686 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2288 Lja-Chr2 26985245 26992647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2288 85 646 Ion Channels AT3G17700 63.074 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2288 K05391 - gsj:114390051 1076.62