Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2286 ATGGTGATCACCTCCACTGTCACACACCCAGAAGAACGAGAACAGAGCTTAAACTCTACTTTTGCTTCCAGATATGTCCGTGAACCTGTTCCAAAGTTCATGATGCCAGGAAAGTCCATACCAAAAGATGCAGCTTATCAGGTAATAAGCGATGAATTGATGCTGGATGGGACTCCAAGGCTTAACTTGGCTTCATTTGTGACCACTTGGATGGAGCCTGAGTGTGATAAGCTCATCATGGCTTCACTTAACAAGAACTATGTTGACATGGATGAGTACCCTGTCACCACCGAGCTCCAGAATCGGTGTGTTAATATAATAGCACACCTATACCATGCTCCTATTGGCGAAAATGAGGCTGCTGTAGGTGTGGGAACTGTGGGGTCATCAGAGGCAATCATGTTAGCAGGTCTAGCTTTTAAAAGGAAATGGCAGACAAAGAGAAAATCAGAAGGCAAGCCATATGATAAGCCCAACATAGTTACTGGGGCTAATGTGCAGGTTTGTTGGGAAAAATTTGCGAGGTACTTCGAGGTTGAGCTCAAGGAAGTGAAACTCACAGAGGGATGCTATGTGATGGACCCTGTGAAAGCTGTTGAAATGGTAGATGAGAAGACCATCTGTGTTGCAGCCATCTTGGGATCAACTCTGACCGGCGAGTTTGAGGATGTGAAGCTTCTTAACGAACTTCTTACTAAAAAGAACAAGGAGACTGGATTGGATGTCCCAATTCATGTAGATGCTGCAAGTGGGGGGTTTATTGCCCCATTTCTATACCCTGATCTAGAGTGGGATTTTCGTTTGCCATTGGTGAAGAGCATCAACGTTAGCGGTCACAAGTATGGTCTTGTCTACGCCGGTATTGGTTGGGTTGTCTGGAGGAGTAAAGATGACTTGCCGGATGATCTTGTTTTTCACATAAATTATCTTGGATCTGATCAGCCTACTTTCACATTGAATTTCTCCAAAGGATCTAGTCAAATCATTGCTCAATATTACCAATTCATACGGCTTGGCTTTGAGGGTTATAAAAATGTCATGGAAAATTGCATGGAGAATGCAAGAGCTCTGAAAGAAGGAATTGAGAAAACAGGGAGGTTTGACATTCTCTCCAAGGATATAGGGGTGCCACTTGTGGCCTTCTCTTTGAAAGACAGCAGCCTGCACACAGTGTTTGAGATAGCAGACCATCTGAGGAAATTCGGGTGGATAGTTCCGGCCTACACAATGCCGCCGGATGCTCAACACATTGCTGTCCTCAGGGTGGTGATCAGGGAGGATTTCAGCCGCAGCTTGGCGGAGAGACTAGTTGCTGACATAGACAGGGTTGTGAAACTCTTGGACACACTTCCAAGCCCTCTTTCCACCAAAGGTGCCCATGTCACAGCTATCAAGAGTGAGACAAGTGAGAAGGTTAAAAAGAATGTGATAGATACTCAAGCAGAGATTTCCAAGTACTGGAAGAGACTTGTGGATGGTAAGAAAGTTGGACCATGCTAG 1500 0.4507 MVITSTVTHPEEREQSLNSTFASRYVREPVPKFMMPGKSIPKDAAYQVISDELMLDGTPRLNLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNIIAHLYHAPIGENEAAVGVGTVGSSEAIMLAGLAFKRKWQTKRKSEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEGCYVMDPVKAVEMVDEKTICVAAILGSTLTGEFEDVKLLNELLTKKNKETGLDVPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRSKDDLPDDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNVMENCMENARALKEGIEKTGRFDILSKDIGVPLVAFSLKDSSLHTVFEIADHLRKFGWIVPAYTMPPDAQHIAVLRVVIREDFSRSLAERLVADIDRVVKLLDTLPSPLSTKGAHVTAIKSETSEKVKKNVIDTQAEISKYWKRLVDGKKVGPC* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2286 499 PANTHER GLUTAMATE DECARBOXYLASE 2 499 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lja2g2286 499 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 384 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lja2g2286 499 SUPERFAMILY PLP-dependent transferases 13 446 IPR015424 -
Lja2g2286 499 Gene3D - 1 68 - -
Lja2g2286 499 Gene3D - 364 451 - -
Lja2g2286 499 CDD DOPA_deC_like 62 442 - -
Lja2g2286 499 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 19 447 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lja2g2286 499 Gene3D - 69 363 IPR015421 GO:0003824
Lja2g2286 499 PANTHER GLUTAMATE DECARBOXYLASE 2 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2286 Lja-Chr2 26948112 26952218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2286 12 499 Calmodulin-binding Proteins AT3G17760 77.869 0.0 795