Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2285 ATGAACGCTTCAACGAGGAAGAAGGTTCAGAAGAAATGCAAGATCAGAGGCTACAATCTCAAACTCGAAGCTCTCGACGAGATCCTCTCCTACGTTTCCCGCTTCGAAGGCGACCTCGAAGACGATGCCATCGATCTCCTCCTCGATCAGCTCGAACACGAATCTCTGAATTCCACCATAATCGATAAGGAACCGGTGCACCGCGTGGTGACTCTGCTGTTGAAAGCTGAGGCGGCTGCCGAGGACGACGAGAGCCCTGACGACTCTGCCGCTGCTGCTTCCGCCCTTCGTGTCGTCGATGCGTTCCTTGTTTCTAAGTTTAAATACGACGCTATTAGGAAGCAATTCTACGAGCATCCAGGCAGCTTACCGATTCATGGGGACGCATCAGCAAAAGCAGCTCTGTACAGGGATAGGTTTCTGTTGTTATTCCAGAGGCTCTCTCGTGACCAGAATTTTTCAAAGCCTGCTTTCGACTCTGAATTTTCACATTTTGGAAGCTGTGAGATATCTCCTATTCAGTCTCTGGTTGGGCGGACAGGTAGAAGATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGACACTTTTATTTGGAAGACCTCTCCGCTTCAGTTGAAATCAATTTATCTAATGCTAAGATAACTACAGGATTCTTTTCAGAGAACACCATAGTTGTGGTAGAAGGAGAAATGCTTGTAGAGGGTATTTTTCAGGTTTTAACATGTGGGTTTCCTCCGTTGGAGGATAGAGATAAGTCACTTAAAACACTTGCAGGGCATGACTTTTTTGGTGGTGGTACTTTTACAAAAGAAGAAACGATCAGACTGGTAGAGATGGAGAAAAGAGCAGTCAATGACATGTTTGTAATATTGTCTGATGTTTGGCTAGACAATGATGAGGCTTTGGGAAAGCTAGGGACAGTTCTGGATGGTTTTGAGAGTGTGGATGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTCTTCTCACCCATGTAACCTTTCGTTTCATTCTTATTCGACCCTCAGGTTGCAGTTTGGCAAGCTAGGGCAAATGATTGCTGCCCATCCACGGCTGAAAGAGCACAGTCGATTTCTTTTTATTCCAGGTCCTGATGATGCAGCAATTTTTCCAGGTCCGTCAACAGTTCTTCCTAGGTGTGCGCTTCCAAAATATATAACTGAGGAGCTCCAAGAGCATATTCCCAATGCCATATTTGCAAGCAACCCCTGCAGGATCAAATTCTATACCCAAGAAATTGTATTTTTCCGCCAGGATCTTCTGTATAGAATGCGCCGTTCATGTTTAATGCCACCTTCAACGGAAGAAACTGATGATCCTTTTCAACATCTTGTTGCTACCATAACCCATCAGAGCCATCTCTGTCCACTCCCTCTAACTGTACAACCTATCCTCTGGAATTATGATCATTGCCTTTATCTTTATCCGACTCCTCACACGATAGTCTTAGGAGACAGAAGTCAGCAGAAGGCGTTCAAGTACACTGGAATTACTTGCTTTAATCCTGGTTCGTTCTCAATTGACAGCACATTTGTCGTGTACCGTCCTTGCTCTCAGGAAGTTGAATTGTCATCCTTGTGA 1608 0.4496 MNASTRKKVQKKCKIRGYNLKLEALDEILSYVSRFEGDLEDDAIDLLLDQLEHESLNSTIIDKEPVHRVVTLLLKAEAAAEDDESPDDSAAAASALRVVDAFLVSKFKYDAIRKQFYEHPGSLPIHGDASAKAALYRDRFLLLFQRLSRDQNFSKPAFDSEFSHFGSCEISPIQSLVGRTGRRWVMGVISQLEDGHFYLEDLSASVEINLSNAKITTGFFSENTIVVVEGEMLVEGIFQVLTCGFPPLEDRDKSLKTLAGHDFFGGGTFTKEETIRLVEMEKRAVNDMFVILSDVWLDNDEALGKLGTVLDGFESVDVVPSLFVFMGNFSSHPCNLSFHSYSTLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAAIFPGPSTVLPRCALPKYITEELQEHIPNAIFASNPCRIKFYTQEIVFFRQDLLYRMRRSCLMPPSTEETDDPFQHLVATITHQSHLCPLPLTVQPILWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNPGSFSIDSTFVVYRPCSQEVELSSL* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2285 535 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 6 534 IPR016266 GO:0003677|GO:0006261|GO:0008622
Lja2g2285 535 Pfam DNA polymerase alpha/epsilon subunit B 289 498 IPR007185 GO:0003677|GO:0006260
Lja2g2285 535 PIRSF DNA_pol_epsilon_2 1 535 IPR016266 GO:0003677|GO:0006261|GO:0008622
Lja2g2285 535 Gene3D - 2 71 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2285 16 492 Core DNA Replication Machinery Family AT5G22110 69.182 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2285 K02325 - zju:107419650 892.878