Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2282 ATGGCGGACACTAATTCAGTTGAAGTGATTTTGGACTTTCTGAAGAAGAACCGGTTCACGCGAGCTGAAGCAGCTTTACGTGGTGAGCTCAATAACCGTTCTGATGTAAATGGGTTCCTTCAGAAGCTTACATTGGAAGACAAGGCGTTGTGTGATGCATCGCAGCATGACAAGGGGAAGCCTGTGGTAGAAAATCAAGGGTCGGGTTCTCGGGATACTGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATAGAGTGTGGGACTGGTAGAAATGCTGCTGAAAGCAAATGGAAAAGTGCTACTCCCACTGAGGAAAGGAATAGATCTAATGAAGTGGTTGGGACGAGTGACAAGAACTTTGCTTTCTCAAAGAGTTCAGAGGCCGGTGTGTTTGATTTGAACTCATGGAAGATTAATCATAGCAACGGTCCTGTGGAGCCTTACCAAAATGATGGTGGAAGCAGGGCTAATAATACTTTGAAGGCTCCGATTTCTCAGCAAGCAAAAAATCAAATGAATGAAGCCCCTATTGCTGCTGCCAGTAATACAAAATCAGGGGAGGAAAATAATGTGCCTTGTGAAAAAAAATCCTTGTGGGTTGGGAGTACTGGTAGTAAAGCCTCCATGGAACCAACGTGTGACCTTATGCAAAACAAAGAATCTAGGGAACTTGACCGGCAGCTTAAATTTAGTAGTTCGTCTTTTAAAGAGAACTTGGCAGATAATGTCTTGTCAAGAACTGATGAGCTTTCTAGTTCATCTTCAGACTTGTGGAAAGATTGCTCAGTCAAGACTGTTTTCCCTTTCTCAAAGGGGGATATGTCTTCTAGCTATAATGGTTCAACTTATTCTGACAAAAAAGAGGAGAATAGAAAGACAGAAATCAGTGATGTTAGGGCATATATAAAAGAGCAGGTGGATGAAGTTGGTAGAGCTTTTTACTTGGGTAAGTTGCAAGGAAGTTCTGAACAGAAGGCGGTCGGTGGCTTAAGTTTTACTGTTGCCCCCGAGAAGCAGAGGGAAGAGTTTCCCAGGCTTCCTCCTGTAAAAATTAAGTCAGAAGATAAGCCCTTGACTATTAATTGGGGGGAGAAGTTAGAATCTGATGGACTCGCTGCAAAGCTTGCTGGTTCGGATAGTTCATTACTTATTGGATCATATCTGGATGTCCCTATTGGACAGGAAATCAAAACTGCAGGTATGAGGAAGGCTACCGGGGGCAGTTGGCTGTCTGTAAGTCAAGGGATTGCAGAGGATACATCTGATCTTGTTTCAGGTTTTGCAACAGTTGGTGATGGGTTGAGTGAATCTGTTGATTATCCAAATGAATATTGGGATTCTGATGAATATGAAGATGACGATGACGTTGGGTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCACATGAAATTGATTACCCTAGTGATAATGAAAAGGGGACTGGGCATGGAAGTGTGCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGACTCCTACTTTTCTGGAGAGCAATATCTTCAAGAAAAGACACATGTCACAGCTTCAAATGATCCCATTGGTCTAAAGGTTACTGAAATTTATGGAAGAACTAATGGTGATGATTTAATGGCTCAATATGATGGACAATTGATGGATGTAGAAGAACTGAATCTGATGCATGCAGAACCTGTCTGGCAGGGCTTTGTCACTCAGACAGATGATCTGATCATACTAGGAGATGAGAAAGTTCTGAATCATAGTGGAAGACCACGACTTGAGGACATGGAAGATGATCAACACGGTTCAGTTAGGTCAATTGGGGTTGGGATCAATAGCGATGCTGCTGACATTGGCAGTGAAGTGCATGGAAGTTTGGTTGGTGGTAGTAGTGAAGGGGATTTAGAATATTTCCGTGATCGCGATACTGCAATGGGGCGCTCCAAACACTCTCATCATGATTTGGATAAGAATTCTATGACCAAATCATTCAAAAATAAGAAGAAAAACGAAAAGAGTGAGTCTAAAAAATATGTCATTGGGGGTGATAAAGGTGTATGCTCGCAAATAAAAACACACATGGATGTCAACTTCTCATTCCCCCCATCTTTTAACGATGGCCAGATGAATCAGGCTGGCTCCAGTAAATCCTTGTGGTCAAATAATTGTCATGCAGATGAAACAGATGACTATATTAATACTTTTGTGGGATCTGATGATTGGAGGCGAAAGAGTAGTGATTCTTCACCTGTTAAAAGTTCGAGGGATGAGGATAATGCTAATGCAGTAAGATCCACAAACTCCTCCCCCACTACAGTATCAGATTATGGGTATGCTGATAAAGAGCATGTCAAGCTAGAAAAGGATGAAGAGGTTGGCATTGCAAGGGAAGATGATCTAGGTGCTGCATCACTAGAGGATGAAGAGGTTGCTGCTGTGCAAGAGCAGGTTAGGCAAATAAAGGCTCAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATCGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTATTAGCTGGGCGCTATCATGTCACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTGCATACAGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAAGACTTCTTCGACCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGACCCTGGAGACAAGTATCACCTTCTGCGATTATATGACTATTTCTATTATAGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCCAACTTATATGAGTTTCATAAATTTAACAGAGAATCAGGGGGGGAAGTGTACTTTACAATGCCAAGATTGCAGTCAATTACCATTCAATGTTTAGAAGCACTTAAGTTTCTACACGGCCTTGGACTAATACATTGTGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTATAGCAGATGTGAGGTGAAAGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCGTATGTTCAGTCCAGGTCATATCGTGCTCCTGAGGTTATTTTGGGACTTCCATATGACAAGAAGATTGATATCTGGTCCCTTGGATGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTTTTCCAAAATGATTCACCTGCCACATTACTTGCTCGGGTGATTGGGATCATTGGTCCAATTGATCAAAGTTTGCTTGCAAAAGGACGGGATACATATAAGTACTTCACAAAAAATCATATGCTTTATGAACGGAATCAGGAAAGCAACCGGTTAGAATACCTGATCCCAAAAAAGACATCATTGAGGCATAGATTGCCGATGGGTGACCAAGGCTTCATTGACTTTGTTAATCATTTGCTCGAGGTTAATCCGAAGAAGCGGCCTTCTGCATCTGAGGCCCTGAAGCACCCATGGTTATCATACCCTTATGAACCAATATCATCTTGA 3540 0.4164 MADTNSVEVILDFLKKNRFTRAEAALRGELNNRSDVNGFLQKLTLEDKALCDASQHDKGKPVVENQGSGSRDTVEVSKELIVKEIECGTGRNAAESKWKSATPTEERNRSNEVVGTSDKNFAFSKSSEAGVFDLNSWKINHSNGPVEPYQNDGGSRANNTLKAPISQQAKNQMNEAPIAAASNTKSGEENNVPCEKKSLWVGSTGSKASMEPTCDLMQNKESRELDRQLKFSSSSFKENLADNVLSRTDELSSSSSDLWKDCSVKTVFPFSKGDMSSSYNGSTYSDKKEENRKTEISDVRAYIKEQVDEVGRAFYLGKLQGSSEQKAVGGLSFTVAPEKQREEFPRLPPVKIKSEDKPLTINWGEKLESDGLAAKLAGSDSSLLIGSYLDVPIGQEIKTAGMRKATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYEDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEDDDQSFAEEDSYFSGEQYLQEKTHVTASNDPIGLKVTEIYGRTNGDDLMAQYDGQLMDVEELNLMHAEPVWQGFVTQTDDLIILGDEKVLNHSGRPRLEDMEDDQHGSVRSIGVGINSDAADIGSEVHGSLVGGSSEGDLEYFRDRDTAMGRSKHSHHDLDKNSMTKSFKNKKKNEKSESKKYVIGGDKGVCSQIKTHMDVNFSFPPSFNDGQMNQAGSSKSLWSNNCHADETDDYINTFVGSDDWRRKSSDSSPVKSSRDEDNANAVRSTNSSPTTVSDYGYADKEHVKLEKDEEVGIAREDDLGAASLEDEEVAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVLAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALKFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSLLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVNHLLEVNPKKRPSASEALKHPWLSYPYEPISS* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2282 1179 PANTHER - 2 1177 - -
Lja2g2282 1179 Pfam Protein kinase domain 868 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2282 1179 SUPERFAMILY Protein kinase-like (PK-like) 857 1172 IPR011009 -
Lja2g2282 1179 CDD PKc_DYRK_like 868 1170 - -
Lja2g2282 1179 ProSitePatterns Serine/Threonine protein kinases active-site signature. 994 1006 IPR008271 GO:0004672|GO:0006468
Lja2g2282 1179 MobiDBLite consensus disorder prediction 651 684 - -
Lja2g2282 1179 ProSiteProfiles Protein kinase domain profile. 868 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2282 1179 MobiDBLite consensus disorder prediction 480 510 - -
Lja2g2282 1179 Gene3D Phosphorylase Kinase; domain 1 862 949 - -
Lja2g2282 1179 MobiDBLite consensus disorder prediction 767 782 - -
Lja2g2282 1179 MobiDBLite consensus disorder prediction 92 113 - -
Lja2g2282 1179 Coils Coil 820 840 - -
Lja2g2282 1179 SMART serkin_6 868 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2282 1179 MobiDBLite consensus disorder prediction 745 786 - -
Lja2g2282 1179 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1177 - -
Lja2g2282 1179 Gene3D Transferase(Phosphotransferase) domain 1 922 1170 - -
Lja2g2282 1179 MobiDBLite consensus disorder prediction 745 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2282 Lja-Chr2 26748898 26758516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2282 867 1165 MAP Kinase Gene Family AT5G19010 31.348 7.83e-30 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lja2g2282 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2282 - - gmx:100786225 1926.37