Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2230 ATGGAATCTAAGAGGAACACTGTTGTTGACAACTACAAAGAAGAAGAAGAAGAAAGTGAAGTGGAAAACAATGAGACCCTCAAGAGAAGAATCTCTAGTCATCCTCTCTATGAGCTTCTGGTTGAAGCTCACTTAGACTGTTTGAAGGTTGGCGACATTTCCAAGTTGGACAGAGAGCTGAAGAAAGAGCAGAAGCAAGCAATAATGAAGAAACAAAACTCGGGCATGTTCAACCACTCTGAGCTTGATCTCTTCATGGAAGCATATTGTTTGGCACTTAACAAGCTTAAAGAAGCAATAGAGGAACCACAAATGAAGTCCATGGCTTTCATAAACAACATGCATTCACAACTTAGGGAGCTCACTGATGCAACCATGCCTGCAGCACCAGCTGAAGAAGCAGCTATTGCATCTTCAAGTGAGTGCACATTCAGAAAAAGCCCTACAATTTAG 453 0.4172 MESKRNTVVDNYKEEEEESEVENNETLKRRISSHPLYELLVEAHLDCLKVGDISKLDRELKKEQKQAIMKKQNSGMFNHSELDLFMEAYCLALNKLKEAIEEPQMKSMAFINNMHSQLRELTDATMPAAPAEEAAIASSSECTFRKSPTI* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2230 150 Coils Coil 53 73 - -
Lja2g2230 150 Coils Coil 9 29 - -
Lja2g2230 150 Pfam KNOX1 domain 26 51 IPR005540 GO:0003677|GO:0005634
Lja2g2230 150 PANTHER FUSED COMPOUND LEAF 1 13 119 - -
Lja2g2230 150 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 13 119 - -
Lja2g2230 150 MobiDBLite consensus disorder prediction 1 26 - -
Lja2g2230 150 SMART KNOX1_2 25 65 IPR005540 GO:0003677|GO:0005634
Lja2g2230 150 SMART KNOX2_2 72 123 IPR005541 GO:0003677|GO:0005634
Lja2g2230 150 Pfam KNOX2 domain 80 122 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2230 Lja-Chr2 25664852 25668091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2230 21 121 Homeobox Transcription Factor Family AT4G08150 36.111 9.12e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2230 - - gsj:114367439 186.037