Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2227 ATGCCTGCAGATGGTGTGGGCATGGTCATTGAGGAAGGAGAGACAGAGACATCAGCTAAGAGCCTCAAAGAGAGAAAGCTTTACCATGTAGACTCCCTCAATGTGGAAGCTGGAAAAGTTCTCAAGACTACAAGTCACAACACCACTAAGATGAGTTGGATAAGTACTCTGAGTCTAGCATTTCAATGCTTGGGTGTTGTGTATGGTGATCTAGGCACATCTCCACTTTATGTGTTTTCAAGCATCTTCAGCAACGGTATTAGTAACAAAGATGACATCCTCGGAGTCTTGTCTCTCATGTTCTACACCATTTTGTTGATGCCTCTGCTTAAGTATGTGTTCATTGTACTAAGGGCAAACGACAATGGCAATGGTGGAGCGTTTGCACTCTATTCACTGCTGTGTAGGCACGCTAAGGTGAGTTTGATTCCAAATCAGCAACCGGAGGACAAGGAGCTTTCTAATTACAAACTCCAAACACCATCTAATGAGCTAAAAAGATCCCATCAAAAGCTAAAGCAGATGCTTGAGAACAGTCATTTTGCAAAGGTTCTGCTTTTAAATATAACCATCTTGGGAACTACCATGATTATAGGGGACGGCATTTTCACTCCAGCTATTTCAGTTCTTTCTGCAGTGAGTGGGATCAGTACCTCATTAGGTCAAGGTGTTGTTGTGGAGATCACTATAGCGATATTGTTCATTCTTTTCGCTGCGCAACGGTTTGGCACTGATAGAGTAGGATTTACATTTGCTCCAATTCTTTCGGTGTGGTTTCTGTTAGTCGGAGGAACTGGTATCTACAACTTGTTCAAATATGACATTGGAGTTTTGCGTGCTGTTAATCCAATGTGCATTGTTGAGTACTTCAAACGGAATGGTAAACAAGGATGGGTGTCACTTGGAGGGGTCTTTCTATGCATCTCGGGATGTGAGGCTATGTTTGCTGACTTGGGTCACTTCAGTGTACGAGCCGTTCAAATTAGCTTTTCTTTTGTCACATTTCCTGCTGTATTGGCCGCATATTGTGGACAAGCAGCATATCTACGAAAATTCCCTGAGAATGTGTCCAACACGTTCTATGCTTGTATACCTCATCACTTGTATTGGCCAACATTTGTTGTTGCTGTTGCTGCTTCAATCATAGCTAGCCAGGCAATAATTTCAGGAGCATTTTCCATTATATCACAGGCCCTAAGCATGGGTTGTTTTCCAAATGTTAAGGTTGTGCACACTTCCACTAAGCATGAGGGTCAGGTGTACATTCCTGAGATCAACTACATGCTCATGATTGGATGCATTGTGGTCAGTGCTGCCTTCAAAAACTCAGAACAACTTAGTCATGCATACGGGATTGCAATAAGTTGTGATATGATAATTACAACATTCCTGGTTTCTGTTGTGATGTTGGTTGTATGGAAGAAGAGTATATTCTTAGTTGCTCTCTTCTATTTTCCATTCTCATTCGTTGAATTTGTATATTTATCTTCACAACTCACCAAGTTCACAAAAGGAGGTTATTTGCCTCTTGTATGTGCTTTTGTCATGACTATGGTGATGGGAACCTGGCATTATGTGCAAAAGGGAAGATACATGTTTGAACTGAAGAACAAGGTTGCCCCTGGGTATTTAAGAATGTTGGCTAATGATCCGAACATAAACCGGGTGCCCGGGATTGGACTTCTTTACTCTGAGCTTGTCCAAGGCATTCCTCCTATATTCCCACACTTCATTGCCAACCTGCCATGTGTCCATTCAGTAGTTGTGTTTGTAACCATCAAGGCAATTCCTATTAGCAGTGTTGCAATTGAAGAGAGGTTTTTGTTTCAACAGGTGGAGCCGAAAGAATACAGAATATTTCGTTGTGTTGTGAGGCATGGTTACAGAGATGTGCTTGGGGATGTTGTGGAGTTTGAGTCCCAGTTAGTGCAGCAGCTGAAAGAATTTATCAGACACGAAAGCCTTTTGCTTGAGGTAGAGGAAACAACAACAGCAGAACAAGTACCTACTCCTACCAGTGAGAGTGAGATAGAAGAAATCACAGATCAAGGTGCTTTAGCTAGGTCTCCTTCATTTTCAGATTGCATTCAATCATTGGGTATGACCAAGGGAGTTGAAAAGGAGATACACTTTATAAAGGAGGCAATGGAGAAGGGTGTGGTGCATTTGCTGGGGGAGGCAGAGGTAGTAGCAGATCCAAAATCATCCATCTTCAATAAGATAGTTGTCAATTATGCTTACAACTTCCTAAGAAAGAACTTTAGGCAAAAGGATCTATTGGTGGCAATCCATGGCAAGAGGCTTCTCAAGGTTGGAATGACATATGAAATATGA 2334 0.4195 MPADGVGMVIEEGETETSAKSLKERKLYHVDSLNVEAGKVLKTTSHNTTKMSWISTLSLAFQCLGVVYGDLGTSPLYVFSSIFSNGISNKDDILGVLSLMFYTILLMPLLKYVFIVLRANDNGNGGAFALYSLLCRHAKVSLIPNQQPEDKELSNYKLQTPSNELKRSHQKLKQMLENSHFAKVLLLNITILGTTMIIGDGIFTPAISVLSAVSGISTSLGQGVVVEITIAILFILFAAQRFGTDRVGFTFAPILSVWFLLVGGTGIYNLFKYDIGVLRAVNPMCIVEYFKRNGKQGWVSLGGVFLCISGCEAMFADLGHFSVRAVQISFSFVTFPAVLAAYCGQAAYLRKFPENVSNTFYACIPHHLYWPTFVVAVAASIIASQAIISGAFSIISQALSMGCFPNVKVVHTSTKHEGQVYIPEINYMLMIGCIVVSAAFKNSEQLSHAYGIAISCDMIITTFLVSVVMLVVWKKSIFLVALFYFPFSFVEFVYLSSQLTKFTKGGYLPLVCAFVMTMVMGTWHYVQKGRYMFELKNKVAPGYLRMLANDPNINRVPGIGLLYSELVQGIPPIFPHFIANLPCVHSVVVFVTIKAIPISSVAIEERFLFQQVEPKEYRIFRCVVRHGYRDVLGDVVEFESQLVQQLKEFIRHESLLLEVEETTTAEQVPTPTSESEIEEITDQGALARSPSFSDCIQSLGMTKGVEKEIHFIKEAMEKGVVHLLGEAEVVADPKSSIFNKIVVNYAYNFLRKNFRQKDLLVAIHGKRLLKVGMTYEI* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2227 777 PANTHER POTASSIUM TRANSPORTER 5 20 776 - -
Lja2g2227 777 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 776 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja2g2227 777 Pfam K+ potassium transporter 60 630 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja2g2227 777 TIGRFAM kup: potassium uptake protein 59 777 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2227 Lja-Chr2 25595851 25599289 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2227 4 777 Inorganic Solute Cotransporters AT4G13420 55.823 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2227 K03549 - gmx:100798735 1053.89