Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2219 ATGGGTTCCCGGTGCTTCTGCTGCGCCTACTGGACAATCTACATGCTCGTTTTCATAGTCATGCTTGTTACCATGATTTTCTGGATAATCATCTCCCCCTCAAGTGTCAAGTTCCACATAACCGACGCCTCCCTCACACGCTTCAACCTCACAAGCAACCACACCTTGTACTACAACTTCAAGGTCAACATCACAGTTAGAAACCCCAATGACAACATCATAGTGCACTATAGGAGGATCACTGCAATTGCTTGGTACAAAGATAATGCCTCTGCTTTTTTCAGTTTGGCGCCCTTCGACCAAGGCCACAAGAACACCACGTTCCTTGGGCTTGTGGTGTTTGAAGGGCAGGGTGTGATGAAGCTCAAATCTAAGCAACTTGGCGAGTACGCGGACGAGACGCGTTTGGGGATTTATAATGACTTGGCTGTGGATTTGGATCTTCGAATTAAAGCTAAGTATGGAAGGTTCAAGAGTAGTCGTTTTAATCCACCCGTAGTACAATGTCGTCGCTTGAGAGTCCCTTTGATTACTTCCAATGGTGAACCATCACCTTCTTTCAATGACACAATATGTAGCACTGGTTATTTCTTTGCAGATCGCGATGATACAAGAGGCTGA 621 0.4573 MGSRCFCCAYWTIYMLVFIVMLVTMIFWIIISPSSVKFHITDASLTRFNLTSNHTLYYNFKVNITVRNPNDNIIVHYRRITAIAWYKDNASAFFSLAPFDQGHKNTTFLGLVVFEGQGVMKLKSKQLGEYADETRLGIYNDLAVDLDLRIKAKYGRFKSSRFNPPVVQCRRLRVPLITSNGEPSPSFNDTICSTGYFFADRDDTRG* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2219 206 PANTHER HARPIN-INDUCED 1 15 197 - -
Lja2g2219 206 Pfam Late embryogenesis abundant protein 63 162 IPR004864 -
Lja2g2219 206 PANTHER OS05G0367900 PROTEIN 15 197 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2219 Lja-Chr2 25426145 25426765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2219 30 176 SNARE and Associated Proteins AT1G32270 31.081 2.08e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2219 - - gmx:100784278 296.975