Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2214 ATGCCAATGCGAATGCGAGTCTCTCTCTTCTTCTTCTTCTTCTTCATCTTCCTCTTCTTCCCCTCTCTCGTTAAACCAGATCTCTCCACCGAACGCGCCGCCCTCTTAACTCTCCGCTCCGCCGTCGCCGGAAGAACGCTTTTCTGGAACGCCACCTCTCCCACCCCCTGCAACTGGTTCGGCGTTTACTGCGACGCCAACACCACCCACATCCTCCAGATCCGCCTCCCCGCCGTCGCCCTCTCCGGCCAACTCCCACATGGCGTCTTCTCCGCCCTCCCCCACCTCCGCACTCTCAGTCTCCGCTTCAATGCCCTCTCCGGCCCACTCCCCTCCGACCTCGCCGCCTGCTCCTCGCTCCGCAACCTCTACCTCCAGCACAACCTCCTCTCCGGTGAGCTCCCGGCGTCGCTCTCCCGCCTCACCGGCCTTGTCCGCCTCAACCTGGCCTCCAATAACTTCTCCGGCCCGGTTCCAGTGGGGTTCCGGAACCTGACCCAGCTCAGGACCCTCCTCCTCCAGGATAATCGTCTCTCCGGTGAGCTCCCAGAGTTGGACAGGGGGGATCTCGCACAGTTCAATGTCTCCAGCAACATGCTCAATGGGCCAGTGCCTGAAAAGCTGCGAAGTTTCTCCAAAGACTCGTTTCTGGGTAATACTCTCTGTGGGAAGCCACTCGAACCTTGTCCTGGGGATGCAGGTAGTGGGAATGGGGTTGAAGGAAATGGTACTGAGAAGAAAAAGAACAAGCTCTCTGGTGGGGCAATTGCTGGGATTGTGATTGGGTCTGTGGTGCTGCTTTTGTTGGTTGTTTTTGCTTTGATTCTTTTGTGCAGGAGCAAGAATGGTGAGAAGACTAGGTCTGTGGATGATGTGGCTGCTAATGTGAAGCATGATGAGAATGTGGGGAATGGTAATGGGTACTTGGCCGCCGCCCCGGCGGTGGTGGCGGTGAATGGTGGTGCCAGGAGTGAAGGGGTGGCTGGTGGTGGTGGGGCTAAGAAGTTGGTGTTTTTTGGTAATCCAGGCAAAGTGTTTGAGTTGGAGGATTTGCTGAGAGCCTCTGCAGAGGTTTTGGGGAAAGGAACTTTTGGGAGTTCTTATAAGACGGCTTTGGAGATTGGGCCTGTGGTGGCTGTGAAGAGGTTGAGGGATGTCACCATTTCTGAGAAGGAATTCAAGGAGAAGATTGAACTGGTTGGAGCAATGGATCATGCCAATTTGGTCCCTCTCAGGGCTTACTATTATAGCAGGGATGAGAAGCTTCTTGTTCTTGATTACTTGCCAATGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGAGCTGGTAGGACACCACTGAATTGGGAAATCAGATCAGGCATTGCACTTGGAGCTGCTCATGGCATTGAGTACCTACATTCACAAGGGCCAAATAATTCTCATGGAAACATAAAGTCATCCAATATCCTCCTAACCAAGTCCTATGATGCCAGGGTATCTGATTTTTGCCTCGCACACCTTGTTGGCCCCTCATCCACACCCAATCGGGTTGCTGGCTACCGCGCGCCAGAGGTAACCGATCTTCGCAAAGTGTCTCAGAAGGCAGACGTGTACAGCTTCGGCGTGTTGCTGTTGGAGCTTCTGACCGGAAAGGCACCCACTCACACCCTCTTGAATGAGGAAGGAGTGGACCTTCCCAGATGGGTGCAATCAGTTGTGAAAGAAGAGTGGAGTTCTGAGGTGTTTGATCTTGAGCTTCTCCGGGATCAGAATGTTGAAGAGGAGATGGTGCAGTTGTTGCAACTTGCAGTGGATTGTGCAGCACCATACCCTGATAACCGCCCTTCAATGTCTGAAGTGAGACAGCAAATAGAAGAGCTGCGCAGGTCAAGCTTGAAAGAAGGTCAAGACCAAATCCAACAACATGATTTGATCAATGATATAGGTGATATATCTTCTAGATGA 1950 0.5277 MPMRMRVSLFFFFFFIFLFFPSLVKPDLSTERAALLTLRSAVAGRTLFWNATSPTPCNWFGVYCDANTTHILQIRLPAVALSGQLPHGVFSALPHLRTLSLRFNALSGPLPSDLAACSSLRNLYLQHNLLSGELPASLSRLTGLVRLNLASNNFSGPVPVGFRNLTQLRTLLLQDNRLSGELPELDRGDLAQFNVSSNMLNGPVPEKLRSFSKDSFLGNTLCGKPLEPCPGDAGSGNGVEGNGTEKKKNKLSGGAIAGIVIGSVVLLLLVVFALILLCRSKNGEKTRSVDDVAANVKHDENVGNGNGYLAAAPAVVAVNGGARSEGVAGGGGAKKLVFFGNPGKVFELEDLLRASAEVLGKGTFGSSYKTALEIGPVVAVKRLRDVTISEKEFKEKIELVGAMDHANLVPLRAYYYSRDEKLLVLDYLPMGSLSALLHGNKGAGRTPLNWEIRSGIALGAAHGIEYLHSQGPNNSHGNIKSSNILLTKSYDARVSDFCLAHLVGPSSTPNRVAGYRAPEVTDLRKVSQKADVYSFGVLLLELLTGKAPTHTLLNEEGVDLPRWVQSVVKEEWSSEVFDLELLRDQNVEEEMVQLLQLAVDCAAPYPDNRPSMSEVRQQIEELRRSSLKEGQDQIQQHDLINDIGDISSR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2214 649 SUPERFAMILY Protein kinase-like (PK-like) 357 619 IPR011009 -
Lja2g2214 649 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Lja2g2214 649 Pfam Leucine rich repeat 85 130 IPR001611 GO:0005515
Lja2g2214 649 Gene3D Transferase(Phosphotransferase) domain 1 428 647 - -
Lja2g2214 649 PANTHER OS05G0588300 PROTEIN 10 649 - -
Lja2g2214 649 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 10 649 - -
Lja2g2214 649 Gene3D Ribonuclease Inhibitor 28 188 IPR032675 -
Lja2g2214 649 Pfam Protein kinase domain 356 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2214 649 ProSiteProfiles Protein kinase domain profile. 353 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2214 649 Gene3D Phosphorylase Kinase; domain 1 331 427 - -
Lja2g2214 649 SUPERFAMILY L domain-like 43 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2214 Lja-Chr2 25333317 25336142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2214 27 638 Receptor kinase-like Gene Family AT1G48480 60.095 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja2g2214 Pkinase 1.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2214 - - gmx:100781597 852.432