Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2213 ATGCCAATGCATTCTCTCTTCTTCTTCATCTTCCTCTTCTTCCCCTCTCTCGTTAAACCAGATCTCTCCACCGAACGCGCCGCCCTCTTAACTCTCCGCTCCGCCGTCGCCGGAAGAACTCTTTTCTGGAACGCCACCTCCCCCACCCCCTGCAACTGGTTTGGCATCTACTGCGACGCCAACACCACCCACATCCTCCAGATCCGCCTCCCCGCCGTCGCCCTCTCCGGCCAACTCCCACATGGCGTCTTCTCCGCCCTCCCCCACCTCCGCACTCTCAGTCTCCGTTTCAACGCCCTCTCCGGCCCACTCCCCTCCGACCTCGCCGCCTGCTCCTCGCTCCGCAACCTCTACCTCCAGCAGAATCTCCTCTCCGGTGAGCTCCCGCCGGCTCTTTCACGTCTCACCGGCCTTGTCCGCCTCAACCTGGCCTCCAACAACTTCTCCGGCCCGGTTCCGGTCGGGTTCCGGAACCTGACCCGGCTCAAGACCCTCCTCCTCCAGGACAATCGGCTCTCCGGTGAGCTTCCCGAGTTGGACAGGGGGGATCTCGCGCAGTTCAATGTCTCCAACAACATGCTCAATGGGTCGGTGCCTGAAAAGCTGCGAAGTTTCTCCAAAGACTCGTTTCTGGGTAATTCACTCTGTGGGAAGCCATTTGAACCTTGTCCTGGGGATGCAGGTAGTGGAAATGGTGATGGTAATAATGGAACTTCAAATGGGGTTGGAGGAAATGAAGGGTTTGTGAAGGAGAAGAAGAAGGGCAAGCTCTCTGGTGGGGCCATTGCTGGGATTGTGATTGGGTCTGTGGTGGTATTTTTGTTGGTTGTTTTTGCTTTGATTCTTTTGTGCAGGAACAAGAATGGTGAGAAGACTAGCTCTGTTGATGATGTGGCTGCTAATGTGAAGCATGATGAGAATGTGGGGAATGGTAATGGGTACTCGGCTGCCACGGCAGCGGTGGTGGCGGTGAATGGTGGTGGAAGGGGTGAAGGGGTGGGTGGTGGTGGTGGTGGTGGAGGTGGGGCTAAGAAGTTGGTGTTTTTTGGTAATTCAAGCAAGGTGTTTGAGTTGGAGGATTTGCTGAGAGCCTCAGCGGAGGTTTTGGGGAAAGGGACTTTTGGGACTTCTTATAAGGCGGTTTTGGAGGTTGGGCCTGTGGTGGCTGTGAAGAGGTTGAAGGATGTCACCATTTCTGAGAAGGAATTCAAGGAGAAGATTGAACTGGTTGGAGCAATGGATCATGTCAGTTTGGTCCCTCTCAGGGCTTACTATTATAGCAGGGATGAGAAGCTTCTTGTTCATGATTACTTTCCAATGGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGAGCTGGTAGGACACCACTGAATTGGGAAATCAGATCAGGCATTGCACTTGGAGCTGCTCATGGCATTGAGTACCTACATTCACAAGGGCCAAATAATTCTCATGGAAACATAAAGTCATCCAATATCCTCCTAACCAAGTCCTATGATGCCAGGGTGTCTGATTTTGGCCTCGCACACCTTGTTGGTCTCTCATCCACACCCAACAGGGTTGCCGGCTACCGTGCGCCGGAGGTTACCGATCCCCGGAAAGTGTCTCAGAAGGCAGACGTGTACAGTTTTGGCGTGTTGCTCTTGGAGCTTCTGACCGGAAAGGCACCTACTCACGCCCTTTTGAATGAGGAAGGAGTGGACCTTCCCAGATGGGTGCAATCAGTTGTGAAAGAAGAGTGGAGTTCTGAGGTGTTTGATCTTGAGCTTCTCAGGGATCAGAATGTTGAAGAAGAGATGGTGCAGTTGTTGCAACTTGCAGTGGATTGTGCAGCACCATACCCTGATAACCGCCCTTCAATGTCTGAAGTGAGACAGCAAATAGAAGAGCTGCGCAGGTCAAGCTTGAAAGAAGGTCAAGACCAAATCCAACAACATGATTTGATCAATGATATAGATGATATATCTTCTAGATGA 1980 0.5217 MPMHSLFFFIFLFFPSLVKPDLSTERAALLTLRSAVAGRTLFWNATSPTPCNWFGIYCDANTTHILQIRLPAVALSGQLPHGVFSALPHLRTLSLRFNALSGPLPSDLAACSSLRNLYLQQNLLSGELPPALSRLTGLVRLNLASNNFSGPVPVGFRNLTRLKTLLLQDNRLSGELPELDRGDLAQFNVSNNMLNGSVPEKLRSFSKDSFLGNSLCGKPFEPCPGDAGSGNGDGNNGTSNGVGGNEGFVKEKKKGKLSGGAIAGIVIGSVVVFLLVVFALILLCRNKNGEKTSSVDDVAANVKHDENVGNGNGYSAATAAVVAVNGGGRGEGVGGGGGGGGGAKKLVFFGNSSKVFELEDLLRASAEVLGKGTFGTSYKAVLEVGPVVAVKRLKDVTISEKEFKEKIELVGAMDHVSLVPLRAYYYSRDEKLLVHDYFPMGSLSALLHGNKGAGRTPLNWEIRSGIALGAAHGIEYLHSQGPNNSHGNIKSSNILLTKSYDARVSDFGLAHLVGLSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVKEEWSSEVFDLELLRDQNVEEEMVQLLQLAVDCAAPYPDNRPSMSEVRQQIEELRRSSLKEGQDQIQQHDLINDIDDISSR* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2213 659 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 659 - -
Lja2g2213 659 MobiDBLite consensus disorder prediction 636 659 - -
Lja2g2213 659 Pfam Leucine rich repeat N-terminal domain 23 59 IPR013210 -
Lja2g2213 659 SUPERFAMILY Protein kinase-like (PK-like) 367 629 IPR011009 -
Lja2g2213 659 PANTHER OS05G0588300 PROTEIN 6 659 - -
Lja2g2213 659 SUPERFAMILY L domain-like 37 205 - -
Lja2g2213 659 Pfam Protein kinase domain 366 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2213 659 Gene3D Transferase(Phosphotransferase) domain 1 439 657 - -
Lja2g2213 659 ProSiteProfiles Protein kinase domain profile. 363 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2213 659 Gene3D Phosphorylase Kinase; domain 1 342 437 - -
Lja2g2213 659 MobiDBLite consensus disorder prediction 227 247 - -
Lja2g2213 659 Gene3D Ribonuclease Inhibitor 22 181 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2213 Lja-Chr2 25325185 25327981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2213 21 648 Receptor kinase-like Gene Family AT1G48480 60.625 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja2g2213 Pkinase 8.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2213 - - gmx:100781597 873.618