Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2211 ATGGTCTTCAAAGGAAGATTCTTCTCTTCCAAGAAATCCGATTCCTCCAGCCCCGATGCTGCTTCCTCCAACAGCCCCCGATCACTCTCCTCCAACTCCCCCTCCAGATCCGACAAGAAAAAACCCAAATCCCCCGCCATAACCGTCACCGGCGGCGCCGCCTCCGCCCCCGCCGCGTGCCGCCAGACGCAAGTCAAGGACGGGACTAAGAAGAAGGATGTTGTCGTCGTCAGGGGTAAAGATAAAGAGAGTCTAGCTCTGTCCGGTTCGAGCTCGAAGAAGTTGACGGCGGCGGCGGCGGAGGGGAGGGATAGGGAATCGCCGGCGGCAGCGTCCTCGTCTTCGGTTTCGCCGATTCTGGCGTCGTCGCTCGGGTTGAATAGGATCAAGACGAGATCGGGGCCGTTGCCGCAGGAGAGCTTCTTCGGGTTCCGTGGTGATAAGGGTGCGGCGCCGGCTCTTGGTGCTAGTAACCTCTCCAGGCCCGGTGTTGGGAAGAAGAAGGAGGTGGTGAGCCAGAGCAGAGTAGGGTTTCACGAGGGTTTTGGTGCTGGTGCCGGTGCCGGAACCGGAGCTTGGGTTGATAATGGAAGCAATTCCGATAGCATGTCTACTGGGAGCGGTGCGCCGTCCAGGGAACGGAGTCCGATTGTGTTGGCCGGGTCGCGGCTACAGAATGGAGAGTCATCCTCTGAAGCAGGGAAGCAAGCACCATCACAGGTTCAGGCTGGAGGCTTAAGCAGTGAAGATGTTTGCACTCCAGAGACAGCATATGATTTTGAAAATCCGAAGGAGTCTGAATCTCCTCGTTTTCAAGCTATATTACGTCTAACAAGTGCACCCAGAAAGAGGTTTCCTTCAGATATCAAGAGTTTTTCCCATGAGTTGAATTCCAAAGGTGTCCGACCTTATCCATTTTGGAAGCCGCGACGGTTAAATAACGTTCAGGAGATCTTGGTCGATATTAGGAATAAATTTGATAAAGAGAAGGAAGAGGTGAACTCCGAATTAGCTATTTTTGCGGCAGACCTGGTTGGAGTTCTCGAAAAAAATGCAGATACTCACCCTGACTGGCAAGAGACAATTGAGGACTTGCTAGTTTTGGCTAGGCGCTGTGCTATGACTTCCTCTGGGGAGTTTTGGCTTCAGTGTGAAAGCATAGTCCAGGATTTGGATGATAGGCGTCAAGAGCTTCCTCAAGGGGTGCTAAAGCATCTTCACACTCGAATGCTTTTCATTCTCACAAGGTGTACTAGATTGTTGCAATTCCACAAGGAAAGTGGTTTGGCAGAGGATGAACATGTTTTTGATCTCCGTCAATCTAGAGTTTTACATTCCGCTAAAAAACCTATTCCTCCTAGTGTGGGAAGGGATGCTAAAATTCCTAGTGCTGCCAAGACCTCAAAGGCTTCAACGAAAAAAGCTTATAGCCAAGAGCAGAGTAGCTTCGGTTGGAAGAAAGATGCTAAACAGCCTGAGAATCTATCGCTTCATGCTGATGATGAAGCTTCAAAAAATTTTGAATCTCCTGGAAGGGATCGAATGGCTTCTTGGAAGAAATTTCCATCTCCATCAGGAAGAAGCCCAAAAGAAATTGCTCAGTTGAAGGACCAAAATTATGGGATGGCTGAACCTTCAAAGACATCAAACAATAAGAGATTCACTTCTGATGTGGATCTCTCTGCTGCTAAGCCATCTGAGCTTCATCCTATCAAAGATTCCCAGGACCATGATTCCAAGCACCAGCACAAAGTCTCCTGGGGCTACTGGGATCAGCCGAATAACAATGAGGAAAATTCAATAATTTGTCGTATATGTGAAGAGGAGGTACCTACTTCACATGTTGAAGATCACTCAAGGATTTGTGCTGTTGCTGACAGTTGTGATCAAAAGGGTCTGAGTGTCAATGAGCGTCTTGTCAGAGTTGCTGAAACACTAGAAAAGATGATGGAATCATGTACACAGAAGGATACCCAACAGATTGTGGGAAGTCCTGATGTTGCGAAAGTGTCAAATTCAAGTATGACTGAAGAATCTGATGTTCTTTCCCCTAAACTTAGTGATTGGTCACGAAGAGGCTCAGAGGATATGCTAGATTGTTTCCCTGAAAGCGATAATTCTGTTTTTATGGATGATCTAAAGGGATTGCCACTCATATCTTGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCTGGGAGCATGACTCCTAGGTCTCCTATAATGACACCGAGGACAAGCCAGATTGATCTGCTCTTGGCAGGGAAGGTTGCATATTCTGAACATGATGATCTGTCACAGATGAATGAACTTGCTGATATAGCACGATGTGTGGCAAATGCACCTCTGGATGATGATCGCACGTCGTCGTATTTATTAACTTGTCTTGATGACTTGCGGATTGTTGTAGAACGAAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACACGCATTGAGAAGCTGATACGGGAGAAGTATCTGCAGCTTACTGAGATGGTGGATGTTGAAAAGATAGATATGGAGAGTGCTGTAATTGATGATGATGTCGTCTTGGACGATGATGTGGTTCGCAGCTTGAGAACAAGTCCAATCCATTCTTCAAAGGATCGTACCTCTATTGATGACTTTGAGATTATAAAACCTATTAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAGAAGAGAACAACTGGTGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATACGTAAGAATGCAGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTGCGCAATCCTTTTGTGGTTCGGTTTTTCTATTCTTTTACTTGTCGTGAGAACTTGTATCTTGTCATGGAGTACCTAAATGGAGGTGATCTGTATTCATTATTACGGAATTTAGGTTGTCTAGATGAGGAAGTTGCCCGTGTGTATATTGCTGAAGTGGTGCTTGCATTAGAGTATTTGCATTCATTGCGTATAGTTCATCGTGACTTGAAGCCAGACAATTTGTTGATTGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACAGATGATTTGTCAGGACCAGCAGTTAGTGGGACATCCCTACTTGGGGAGGATGAACCTCGTGTGCTTACATCTGAGGATCAAATAGAACGGAGGAAGCAACGTTCTGCTGTGGGCACGCCTGATTACTTAGCACCAGAGATACTTTTGGGAACTGGACATGGCTATACTGCGGATTGGTGGTCTGTTGGAGTTATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAATGCTGAGCATCCTCAGACTATATTTGATAATATTCTTAACCGTAAGATACCCTGGCCCGCAGTTCCTGAAGAAATGAGTCCTGAAGCACATGATCTTATAGACCGATTATTGACAGAAGATCCTAATCAAAGACTAGGAGCCAGAGGAGCATCAGAGGTGAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACGCTTGCCAGGCAGAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGACACAAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGCCTTGTATATCCAGCAAGTGATATGGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGCAGCAGTTGCTTGAGCAATCGCCAGGATGAAGTGGGAGATGAATGTGGAGGCCTTGCTGAGTTTGATTCTACTTCATCTGTCAATTATTCTTTTAGTAATTTCTCCTTTAAGAATCTCTCGCAGCTTGCATCAATCAACTATGATCTCACCAAGGGATGGAAAGATGATCCGTCAACAAATTCTAGTGCTTAG 3888 0.4563 MVFKGRFFSSKKSDSSSPDAASSNSPRSLSSNSPSRSDKKKPKSPAITVTGGAASAPAACRQTQVKDGTKKKDVVVVRGKDKESLALSGSSSKKLTAAAAEGRDRESPAAASSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKGAAPALGASNLSRPGVGKKKEVVSQSRVGFHEGFGAGAGAGTGAWVDNGSNSDSMSTGSGAPSRERSPIVLAGSRLQNGESSSEAGKQAPSQVQAGGLSSEDVCTPETAYDFENPKESESPRFQAILRLTSAPRKRFPSDIKSFSHELNSKGVRPYPFWKPRRLNNVQEILVDIRNKFDKEKEEVNSELAIFAADLVGVLEKNADTHPDWQETIEDLLVLARRCAMTSSGEFWLQCESIVQDLDDRRQELPQGVLKHLHTRMLFILTRCTRLLQFHKESGLAEDEHVFDLRQSRVLHSAKKPIPPSVGRDAKIPSAAKTSKASTKKAYSQEQSSFGWKKDAKQPENLSLHADDEASKNFESPGRDRMASWKKFPSPSGRSPKEIAQLKDQNYGMAEPSKTSNNKRFTSDVDLSAAKPSELHPIKDSQDHDSKHQHKVSWGYWDQPNNNEENSIICRICEEEVPTSHVEDHSRICAVADSCDQKGLSVNERLVRVAETLEKMMESCTQKDTQQIVGSPDVAKVSNSSMTEESDVLSPKLSDWSRRGSEDMLDCFPESDNSVFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPIMTPRTSQIDLLLAGKVAYSEHDDLSQMNELADIARCVANAPLDDDRTSSYLLTCLDDLRIVVERRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDMESAVIDDDVVLDDDVVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRIVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPRVLTSEDQIERRKQRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNRKIPWPAVPEEMSPEAHDLIDRLLTEDPNQRLGARGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDMEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSTSSVNYSFSNFSFKNLSQLASINYDLTKGWKDDPSTNSSA* 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2211 1295 Coils Coil 636 656 - -
Lja2g2211 1295 MobiDBLite consensus disorder prediction 447 530 - -
Lja2g2211 1295 MobiDBLite consensus disorder prediction 1223 1240 - -
Lja2g2211 1295 MobiDBLite consensus disorder prediction 1218 1241 - -
Lja2g2211 1295 Pfam Protein kinase domain 884 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2211 1295 CDD STKc_MAST_like 890 1178 - -
Lja2g2211 1295 MobiDBLite consensus disorder prediction 491 515 - -
Lja2g2211 1295 ProSiteProfiles AGC-kinase C-terminal domain profile. 1174 1278 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lja2g2211 1295 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 1293 - -
Lja2g2211 1295 MobiDBLite consensus disorder prediction 1 118 - -
Lja2g2211 1295 ProSiteProfiles Protein kinase domain profile. 884 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2211 1295 SMART serkin_6 884 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2211 1295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1003 1015 IPR008271 GO:0004672|GO:0006468
Lja2g2211 1295 Gene3D Transferase(Phosphotransferase) domain 1 968 1191 - -
Lja2g2211 1295 MobiDBLite consensus disorder prediction 465 487 - -
Lja2g2211 1295 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 27 1293 - -
Lja2g2211 1295 MobiDBLite consensus disorder prediction 222 249 - -
Lja2g2211 1295 MobiDBLite consensus disorder prediction 9 33 - -
Lja2g2211 1295 MobiDBLite consensus disorder prediction 728 747 - -
Lja2g2211 1295 MobiDBLite consensus disorder prediction 181 251 - -
Lja2g2211 1295 Gene3D Phosphorylase Kinase; domain 1 882 1202 - -
Lja2g2211 1295 SUPERFAMILY Protein kinase-like (PK-like) 881 1214 IPR011009 -
Lja2g2211 1295 MobiDBLite consensus disorder prediction 193 211 - -
Lja2g2211 1295 MobiDBLite consensus disorder prediction 65 80 - -
Lja2g2211 1295 Coils Coil 312 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2211 Lja-Chr2 25294088 25311138 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2211 1 1289 AGC Kinase Gene Family AT3G17850 65.358 0.0 1620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Lja2g2211 Pkinase 2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2211 - - gmx:100776995 2050.4