Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2180 ATGAAGAATCTTCTTAAGAAGCTTCATATCATGTCTGATCAATCAGAAAATGGACAAGGGTCTTCTTCTTCTTCCTCTAAGAAGCATGTACACTCTCGTTCCCCTCAAAGTTCTGAGCATAAACCCTTTTCTGGGCTCTCTAATTGGTTGCATTCAGTGGCTAATAGGCAGAGTTCTAGTCCTCCAGCTTTGAAGCAGGGGAGAGGAGAGAAAATGGAGTCATCTGACACAGTGAGCAGTGGTGGTGGTTTGGATGTTGTTTCAGATTCAGCAGGGCATGATTCAGGGTCTAGTGCTTCGAGGGATCCTGAAGTAGAAGAAGAGTACCAGATACAGCTTGCTTTGGAGCTGAGTGCAAAGGAGGACCCTGAAGCTGTGCAAATTGAAGCTGTTAAGCAGATCAGTTTGGGGTCTTGTGACCCTGATAATACACCAGCAGAAGTTGTGGCCTACCGATACTGGAATTACAATGCTCTTGGTTATGATGACCAAATCTTGGATGGCTTCTATGATCTATATGGGATCTTAACTGAGTCAACCTCTGCAAGAATGCCTTCCCTTGTGGATCTGCAAGGAAGATCAATCTCTAGTAACGTTGCATGGGAAGCTGTCTTGGTGAATAGGGCGGCTGATTTTAATTTGTTGAAACTTGAGCAAAAAGCCTTGGAGCTGACTGTCAATTCAAGACCTGGTTCTGAAGTAATTGTAGATAACAATTTGGTGTGCAAGCTTGCAATATTTGTGGCTGACTATATGGGTGGACCAGTTGGAGATCCTGAAAGCATGACAAAAGCGTGGGGGAGTCTTAGTTACAGTCTGAAAGCAACCCTTGGTAGCATGGTTTTGCCACTTGGTTCCCTAACTATTGGATTGGCTCGGCATCGGGCCTTGTTATTTAAGGTTCTAGCCGATAGTTTGGGCATCCCATCTCGGTTGGTGAAAGGACTGCAATATACAGGCTCTGATGATGTGGCAATAAACTTTGTCAAGATTGATGATGGGAGGGAGTACATTGTTGACCTGATGGCAGATCCTGGAACTCTTATTCCATCTGATGCAACTGGATCACATATTGAGTTTGATGAGTCCTTTTTTGTTGCCAGTCCTTTATCAAGAGACCCTGATTCCTCTCACCTAGCATCATCTAGCAGTGGGGTTGGAAGTTCTTCTGGAGAAACTTCATTTTTTGGGATGCTGGACAGAGAAAGCAGATCAAAACATTCTTCCTATGCAGAGAAAGAATCTGATGTAAGCAGGCGAGCCACAGCAAAGGAGGAATCAATGAGACCATTGGATGAATTCACAAGTTCCCACAAAGTTGAGAAGATCACGGTGCAAGAAGTTTCTGGCAGACCGAATAATCCATATGTGCTTGCAAGATCTTCTTCTTGGAGTGAAGGGACCAGTTCCCCTGCAGTACGTAGAATGAAAGTCAAAGATTTTTCCCAATATATGATTGATACTGCCAAGGAAAACCCTCAATTAGCTCAGAAACTTCATGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAATTTATTTTCTGACGTTTATCATGAGGAATTAAGCTCCCTAACCGACACCAACTTCCCAACTGAAGAGAAATATGAACATAAACGGGGAAGTGGACAGCAGGAAACTGAGGTTGGCAATAATATTGGTCCTCCTCAAATTTTTTCTCCTTTGCCTCACGGCAGATTTCATCCCAAAGAAAGTTCTGTCAATCAGCTGGAGAATTCAAAGCCTGTAGAAGGTTTAGGATTCGACCTTCCACTCCTTACAAGGGAAGCAGCCGGACAACATATACCAACTCAGGTAAAATATGGAAAAAATGTCCCGGTTGCTGCTGCTGCAGCAGCCGCCGCTGCCGTTGTTGCATCCTCTATGGTAGTTGCTGTGGCAAAGTCAAGCACTGACTCAAACATTGAGCTTCCAGTAACGGCAGCTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCTGCTGTGAGTAAGCACTATGAGCAGAGCAGTCAAAGTGATGGAGATAAGGACAGTGATGGTTATGAGCTGAAGGGTAGTGGTGATGGAGTATATAGTGCTTTAGGAGCAAATTTAGAGGGTGAGAGAAGATCTGATCGCTCAGTAGTTAGTAATGATAGCACAAAATCTGATTCTGCTTTAGATGAAGTTGCTGAGTATGATATTCCATGGGAGGAAATCACTCTGGGTGAGCGTATTGGACTTGGATCATATGGGGAGGTGTACCGTGGTGAATGGCGTGGAACTGAAGTTGCTGTGAAGAGGTTTCTTGATCAGGATATATCCGGTGAATCACTTGAAGAATTCATAAGTGAGGTCAAAATAATGAAAAGATTGAGGCATCCAAACGTCGTTCTCTTCATGGGAGCTGTAACTCGACCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATTCACCGATCAAACAGTCAATTAGATGAGCGAAGGCGTTTGAGAATGGCCCTGGATACTGCTCGAGGAATGAACTATTTACACAGCTGCAGTCCAATGATAGTGCATCGTGATTTGAAGTCCCCGAACCTTCTTGTTGACAAAAATTGGGTCGTAAAGGTGTGTGATTTTGGCTTATCACGTATGAAGCTTAGCACGTTCCTCTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCCGAGGTGTTGAGAAATGAACCGTCAAATGAAAAGTGTGACGTTTATAGCTTTGGGGTCGTGTTATGGGAGCTTTCTACTTTGCAGCAACCCTGGGGAGGATTGAATCCAATGCAAGTTGTTGGTGCTGTGGGATTCCAACATCGCCGTCTTGACATTCCGGATAATATGGACCCTGCCATTGCAGAGATTGTCAGGAAATGCTGGCAGACAGATTCAAAGTTGAGACCTACTTTTGCTGAAATATTGGCGACTCTGAAGCCATTACAGAAGCAAATTGTTGGTTCTCAAGTGCCTCGACCAGTTGCATCAGCTAGGCAAGAAAAGGCCCAGCCATCAGTTGCAGAAGATCCAGAAAATTAG 3063 0.4424 MKNLLKKLHIMSDQSENGQGSSSSSSKKHVHSRSPQSSEHKPFSGLSNWLHSVANRQSSSPPALKQGRGEKMESSDTVSSGGGLDVVSDSAGHDSGSSASRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDQILDGFYDLYGILTESTSARMPSLVDLQGRSISSNVAWEAVLVNRAADFNLLKLEQKALELTVNSRPGSEVIVDNNLVCKLAIFVADYMGGPVGDPESMTKAWGSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPSRLVKGLQYTGSDDVAINFVKIDDGREYIVDLMADPGTLIPSDATGSHIEFDESFFVASPLSRDPDSSHLASSSSGVGSSSGETSFFGMLDRESRSKHSSYAEKESDVSRRATAKEESMRPLDEFTSSHKVEKITVQEVSGRPNNPYVLARSSSWSEGTSSPAVRRMKVKDFSQYMIDTAKENPQLAQKLHDVLLESGVVAPPNLFSDVYHEELSSLTDTNFPTEEKYEHKRGSGQQETEVGNNIGPPQIFSPLPHGRFHPKESSVNQLENSKPVEGLGFDLPLLTREAAGQHIPTQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSTDSNIELPVTAAATAAAVVATTAAVSKHYEQSSQSDGDKDSDGYELKGSGDGVYSALGANLEGERRSDRSVVSNDSTKSDSALDEVAEYDIPWEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFISEVKIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRSNSQLDERRRLRMALDTARGMNYLHSCSPMIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKLSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVVLWELSTLQQPWGGLNPMQVVGAVGFQHRRLDIPDNMDPAIAEIVRKCWQTDSKLRPTFAEILATLKPLQKQIVGSQVPRPVASARQEKAQPSVAEDPEN* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2180 1020 Gene3D Transferase(Phosphotransferase) domain 1 813 998 - -
Lja2g2180 1020 MobiDBLite consensus disorder prediction 10 64 - -
Lja2g2180 1020 SMART serkin_6 734 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2180 1020 Pfam Protein tyrosine and serine/threonine kinase 734 986 IPR001245 GO:0004672|GO:0006468
Lja2g2180 1020 MobiDBLite consensus disorder prediction 997 1020 - -
Lja2g2180 1020 Pfam Ethylene-responsive protein kinase Le-CTR1 146 349 - -
Lja2g2180 1020 PRINTS Tyrosine kinase catalytic domain signature 894 904 IPR001245 GO:0004672|GO:0006468
Lja2g2180 1020 PRINTS Tyrosine kinase catalytic domain signature 847 865 IPR001245 GO:0004672|GO:0006468
Lja2g2180 1020 PRINTS Tyrosine kinase catalytic domain signature 808 821 IPR001245 GO:0004672|GO:0006468
Lja2g2180 1020 PRINTS Tyrosine kinase catalytic domain signature 913 935 IPR001245 GO:0004672|GO:0006468
Lja2g2180 1020 PRINTS Tyrosine kinase catalytic domain signature 957 979 IPR001245 GO:0004672|GO:0006468
Lja2g2180 1020 SUPERFAMILY Protein kinase-like (PK-like) 719 985 IPR011009 -
Lja2g2180 1020 MobiDBLite consensus disorder prediction 1 108 - -
Lja2g2180 1020 MobiDBLite consensus disorder prediction 406 437 - -
Lja2g2180 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 853 865 IPR008271 GO:0004672|GO:0006468
Lja2g2180 1020 MobiDBLite consensus disorder prediction 533 582 - -
Lja2g2180 1020 Gene3D Phosphorylase Kinase; domain 1 727 811 - -
Lja2g2180 1020 CDD STKc_MAP3K-like 740 986 - -
Lja2g2180 1020 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1018 - -
Lja2g2180 1020 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1018 - -
Lja2g2180 1020 ProSiteProfiles Protein kinase domain profile. 734 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2180 1020 ProSitePatterns Protein kinases ATP-binding region signature. 740 761 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2180 Lja-Chr2 24794205 24805795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2180 1 1005 MAP Kinase Kinase Kinase AT1G73660 60.585 0.0 1138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lja2g2180 PK_Tyr_Ser-Thr 3.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2180 - - gmx:100816332 1473.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2180 2 24794205 24805795 Lja2g2180 2 24794205 24805795 ECH
Lja4g0029 4 247814 257180 Lja2g2180 2 24794205 24805795 PCT