Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2177 ATGGGTGGTGTAGGAACATTCACGGATGGCATTCGTCGATTCTTCAATCGTCGTACTACTTCTATTAACTCTAACGTAGTTGTTGATCATAACGATGATGATGTCGGAACCAATGCCAACAGCGTTCACATTGCCAACAACAACATCGACCCTTCTTCCTTGAATCCTCTCAAAGTGCCTGCTCAATCCAATTTCGTACCTTCTTCCATGGATCGTCCCAAAAAGGGTGCTCCAGAGGCAGAGTTTTTTACTGAGTATGGAGAAGCAAGTCGGTACCAGGTTCATGAAGTGGTTGGAAAAGGAAGTTATGGTGTTGTGGTTTCTGCCGTCGACACTCGTACTGGGGAAAAGGTTGCGATTAAGAAAATCCATGATGTTTTTGAGCATGTATCAGATGCCACTCGGATCCTTAGAGAAGTTAAGCTTCTTCGTTTGCTCAAACATCCTGATATAGTAGAAATTAAGCATATAATGCTTCCGCCTTCACGAAGAGAGTTCAAGGATGTTTATGTCGTGTTTGAGTTGATGGAGTCTGACCTTCATCAAGTTATTAAGGCAAATGATGATCTTACTCCTGAGCACTACCAATTTTTCTTGTACCAACTTCTTCGGGGCTTGAAATATATACATACAGCAAATGTGTTTCATCGGGACTTGAAGCCAAAAAATATTCTAGCTAATGCTGATTGCAAGCTAAAAATATGTGATTTTGGGCTTGCTCGAGTCTCATTTAATGATGCTCCATCAGCAATATTCTGGACTGACTATGTTGCAACTAGGTGGTACCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACTCCCGCAATTGATACTTGGAGCATTGGATGCATATTTGCAGAAATGCTTAGTGGCAAGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTCATTACTGATTTGCTTGGTACTCCCCCTCCTGAATCCATTTTGAGGATTCGAAATGAGAAGGCTAGAAGGTACCTTAGCAGCATGCGAAAAAAGCAACCACTTCCATTCACCAAAAAATTTCCACATGCAGATCCGTTGGCCCTTCATTTGCTGGAGAGATTAATTGCATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCACTATCCGATCCTTACTTCCATGGTTTAGCAAATGTGGACCGTGAACCGTCTACTCAACCCATTTCGAAACTTGAGTTTGATTTTGAGAGAAGAAAATGTACGAAAGATGATATTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCCCAAATGCTCCAAGAGTATCTTCAGGGTGGAGATCAAACAAGCTTCATGTATCCGAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGCAAAGGTGAGCGAGGCTCTCCAATGCTGAGACAGCATGCCTCGTTACCTAGAGAGCGTGTTCCTGCTCCCAAGGATGACAATAATCAAAATGATGATTTGGAAAAGCCAACTGGGTCAAATCTTCCGAGTCCTCCAGTGTCTGATGTGACGGATTCTAGTAACACAGATGCGCAAAAAGGACCCTCCACGCAAGGCTTCAGCATACGTAGCTTGTTGAAGAGTGCCAGCATTAGCGGTTCAAAATGTATAAATGTGAAACAAAATAAAGATCCAGAGGAGGAGCCAATTCCAGAGGTCAATGATGAGACAGTGGATGAGTTGACACAGAAGGTTGCTAATGCTGCTCTCCATTCTTAG 1749 0.4271 MGGVGTFTDGIRRFFNRRTTSINSNVVVDHNDDDVGTNANSVHIANNNIDPSSLNPLKVPAQSNFVPSSMDRPKKGAPEAEFFTEYGEASRYQVHEVVGKGSYGVVVSAVDTRTGEKVAIKKIHDVFEHVSDATRILREVKLLRLLKHPDIVEIKHIMLPPSRREFKDVYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDTWSIGCIFAEMLSGKPLFPGKNVVHQLDLITDLLGTPPPESILRIRNEKARRYLSSMRKKQPLPFTKKFPHADPLALHLLERLIAFDPKDRPTAEEALSDPYFHGLANVDREPSTQPISKLEFDFERRKCTKDDIRELIYREILEYHPQMLQEYLQGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERGSPMLRQHASLPRERVPAPKDDNNQNDDLEKPTGSNLPSPPVSDVTDSSNTDAQKGPSTQGFSIRSLLKSASISGSKCINVKQNKDPEEEPIPEVNDETVDELTQKVANAALHS* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2177 582 SMART serkin_6 92 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2177 582 MobiDBLite consensus disorder prediction 543 568 - -
Lja2g2177 582 ProSitePatterns Protein kinases ATP-binding region signature. 98 122 IPR017441 GO:0005524
Lja2g2177 582 SUPERFAMILY Protein kinase-like (PK-like) 88 388 IPR011009 -
Lja2g2177 582 MobiDBLite consensus disorder prediction 497 531 - -
Lja2g2177 582 ProSiteProfiles Protein kinase domain profile. 92 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2177 582 ProSitePatterns MAP kinase signature. 127 230 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lja2g2177 582 Gene3D Phosphorylase Kinase; domain 1 108 429 - -
Lja2g2177 582 Pfam Protein kinase domain 92 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2177 582 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 59 522 - -
Lja2g2177 582 MobiDBLite consensus disorder prediction 478 531 - -
Lja2g2177 582 CDD STKc_TDY_MAPK 91 428 - -
Lja2g2177 582 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 59 522 - -
Lja2g2177 582 MobiDBLite consensus disorder prediction 481 496 - -
Lja2g2177 582 Gene3D Transferase(Phosphotransferase) domain 1 178 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2177 Lja-Chr2 24762276 24770378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2177 77 582 MAP Kinase Gene Family AT3G18040 79.843 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lja2g2177 Pkinase 3.6e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2177 - - gmx:100780831 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2177 2 24762276 24770378 Lja4g0031 4 266227 270678 ECH
Lja2g2177 2 24762276 24770378 Lja2g2177 2 24762276 24770378 ECH