Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2166 ATGGGAGAAGTGAAGCTGATTGCCACTCCTCAAAGCTTCCCTTGTGCCAGAATTGAATGGGCTCTAAGGATAAAGGGTGTGGAATATGAGTACATACAAGAAGATTTAGCAAACAAGAGTCCTTTGCTTCTTCAATCCAACCCTGTCCACAAGAAAGTTCCAGTGCTCCTGCATGATGGAAAACCAATTGCTGAATCACTTGTGATCCTTGAGTACATAGATGAGACATGGAAGGAGAACCCTCTGCTACCACTGGATCCATATGAGAGAGCACTGGCTCGCTTCTGGGCAAGGTTTATTGATGAGAAGTGTGTGATTGGTGTATGGGGAGCTTGTGTGGCCCAAGGAGAAGAGAAGGGGAAAGCTATAGAAGCTGCACTAGATTCACTGGAATTTCTTGAGAAACAGATTCAAGGGAACAAGTACTTTGGTGGAGAGAGGATAGGGTATCTTGATATTGTAGCTGGTTGGTTATCTCATTGGATCAATGTCCTGGAAGAACTTGGAGACATGGAACTACTCACAGCTGAGAGGTTCCCATCTCTTCATGAATGGAGCCAGAATTTCATTCAGACTTCACCTGTCAAAGATTGCATTCCACCCAGGGAATCAGTGGTTGAATATTTCAGCTTTGGCATCAACTATGTGCGTTCCTTGGCATCCAATAAATAA 672 0.442 MGEVKLIATPQSFPCARIEWALRIKGVEYEYIQEDLANKSPLLLQSNPVHKKVPVLLHDGKPIAESLVILEYIDETWKENPLLPLDPYERALARFWARFIDEKCVIGVWGACVAQGEEKGKAIEAALDSLEFLEKQIQGNKYFGGERIGYLDIVAGWLSHWINVLEELGDMELLTAERFPSLHEWSQNFIQTSPVKDCIPPRESVVEYFSFGINYVRSLASNK* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2166 223 CDD GST_N_Tau 4 77 - -
Lja2g2166 223 Gene3D Glutaredoxin 1 82 - -
Lja2g2166 223 CDD GST_C_Tau 87 211 IPR045074 GO:0004364|GO:0006749
Lja2g2166 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 208 IPR010987 -
Lja2g2166 223 SFLD Main (cytGST) 1 210 - -
Lja2g2166 223 Gene3D - 83 217 - -
Lja2g2166 223 Pfam Glutathione S-transferase, C-terminal domain 117 191 IPR004046 -
Lja2g2166 223 Pfam Glutathione S-transferase, N-terminal domain 15 75 IPR004045 -
Lja2g2166 223 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Lja2g2166 223 SUPERFAMILY GST C-terminal domain-like 75 211 IPR036282 -
Lja2g2166 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Lja2g2166 223 SFLD Main.3: Omega- and Tau-like 1 210 IPR045073 -
Lja2g2166 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 221 IPR045073 -
Lja2g2166 223 PANTHER GLUTATHIONE S-TRANSFERASE 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2166 Lja-Chr2 24468363 24470914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2166 3 209 Glutathione S-transferase Gene Family AT2G29420 47.343 2.23e-72 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2166 K00799 - gmx:547587 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2166 2 24468363 24470914 Lja2g2166 2 24468363 24470914 ECH