Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2121 ATGTATGCGCGCGTGTGCGTTCATGTGCTGCACCCAAATCTGGTGTCACTCAATGAATGCACTGCTCGCAATAGCCCTGAGCTTCTCCTTGTGTATGAGTACATCTCCAATGGAACTGTTGCTAAGCATCTTCGCGGTCGCCGAGCCAACCCTGCACTCTCTTGTCCAAGTCGGATGTGTATTGCTGTGGAGACCGCCAGTGCGCTCAAATATCTTCACGCAGCTGAAGTCATCCACCGAGATGTGAAAACCGATAATATTCTGCTTGACATGCATTTTCATATCAAACTTGCAGATTTCATTCTTTCACGTCTTCTCCGGCATGATGTATCGCATGTTACAACAGGTCTACTAGGGACACCGGGGTATGTGGATACAGAGTACAGTCAGTGCTATCGGCTTACCAGCAAAAGTAATGTCTACAACTTTGGAGTTGTGCTGATTGAGCGTATATCATCCTTACCTACGTTTGAGTGGCATACAACAGAAAACCTTTTGGCCAACATTGCTATCACCAAAATTCAGAACCAAAAATTGCATGAGCTGGTGCACCCATCACTTGGATTTGATTCAGATAGCAAGGTCAACCAAATGATCAGTGGTGTGGTCGAGCTAGCATTTCGGTGCTTGCAGAGTTCCGGAAGTTTGAGACCTTCCATGGACGAAGTTCTGAGTACCCTCTAG 684 0.4664 MYARVCVHVLHPNLVSLNECTARNSPELLLVYEYISNGTVAKHLRGRRANPALSCPSRMCIAVETASALKYLHAAEVIHRDVKTDNILLDMHFHIKLADFILSRLLRHDVSHVTTGLLGTPGYVDTEYSQCYRLTSKSNVYNFGVVLIERISSLPTFEWHTTENLLANIAITKIQNQKLHELVHPSLGFDSDSKVNQMISGVVELAFRCLQSSGSLRPSMDEVLSTL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2121 227 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 227 - -
Lja2g2121 227 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2121 227 SMART serkin_6 4 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2121 227 SUPERFAMILY Protein kinase-like (PK-like) 8 227 IPR011009 -
Lja2g2121 227 Gene3D Transferase(Phosphotransferase) domain 1 2 227 - -
Lja2g2121 227 Pfam Protein kinase domain 8 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2121 227 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 7 227 IPR044652 -
Lja2g2121 227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2121 Lja-Chr2 23558920 23559679 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2121 11 227 Receptor kinase-like Gene Family AT1G25390 55.204 3.49e-73 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lja2g2121 Pkinase 3.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2121 - - cam:101492618 279.256