Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2114 ATGGGTTCGAAAGTCTCTTCCATAGCTACTTTCTCATTTTCCTTCCTACTTATTTTTCTCTTCATTGGATTTTTTGCTTTTGCAAATGGTAAGGACGAGGGCACTCACAATGTTTATGGCACTAGCGTTTTAATTAGTGATAGTGTTGTTGTTAGTCAAGATGGAAGCGGAAACTTCAACACTATCAACCAAGCTGTGGCTGCTGCACCAAATAACAATAATGCAATAAAGGGTTATTTCTTGATTAATATCAAAGAGGGGGTGTATAAAGAATATGTGTTCATCCCTAAGAACAAGCCATATATCATGATGGTTGGACAAGGATTCAACCGAACAGTCATTACCGGAAACCGCAACCATGATCAAGGATTGAAAACACATGACACTCCAACATTTGCGATTAACCTCACGTTCCAGAACACTGCTAGGCCAAGCAAAGAACAAGCAGTTGCATTAAGAAATGAAGCAGATATGTCCACCTTCTACCGTTGCATCTTTGATGGGTACCAGGATACTCTATATGTAGATAAAAATAGACAATTCTATATAGAATGTGACATATATGGAACAGTAGATTTCATATTTGGAGGTGCTCAGGTTGTTTTGCAAAATTGCAACATATATCCCCGTCTTCCTCAACATCGACAGTTTAATACCATCACTGCTTCGGAAAGAATGTCCCCACCGGATAAGGCATCCATTACAATTCACAACTGCACTGTTAAACCTACTAGGGATCTAGCTTCGAGCAATGGTAGTGTTAAGACCTACCTCGGAAGGCCCTGGAAGAAGTATTCTAGAGTTGTTGTTATGCAAACCTTTTTGGACAGTCTAATAGACCCAGCAGGTTGGTTTATAGGGAAGGGCGATGGTACATCGTACTTCGCAGAGTATGACAACAGAGGACCTGGGGCAAACACTTCTGGTAGAGCAACATGGCCTGGTTACCATCTCATAAATGCTGCTGATGCTGCTAAATTTACAGTAGCCAATTTTCTGCAAGGAAATGATTGGTTGCCTCAAACTGGAGTGCCTTACTTTCCTGGACTTATGCCTTGA 1059 0.4098 MGSKVSSIATFSFSFLLIFLFIGFFAFANGKDEGTHNVYGTSVLISDSVVVSQDGSGNFNTINQAVAAAPNNNNAIKGYFLINIKEGVYKEYVFIPKNKPYIMMVGQGFNRTVITGNRNHDQGLKTHDTPTFAINLTFQNTARPSKEQAVALRNEADMSTFYRCIFDGYQDTLYVDKNRQFYIECDIYGTVDFIFGGAQVVLQNCNIYPRLPQHRQFNTITASERMSPPDKASITIHNCTVKPTRDLASSNGSVKTYLGRPWKKYSRVVVMQTFLDSLIDPAGWFIGKGDGTSYFAEYDNRGPGANTSGRATWPGYHLINAADAAKFTVANFLQGNDWLPQTGVPYFPGLMP* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2114 352 PANTHER PECTINESTERASE 38 348 - -
Lja2g2114 352 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 38 348 - -
Lja2g2114 352 SUPERFAMILY Pectin lyase-like 46 349 IPR011050 -
Lja2g2114 352 Gene3D - 42 350 IPR012334 -
Lja2g2114 352 ProSitePatterns Pectinesterase signature 2. 187 196 IPR033131 -
Lja2g2114 352 Pfam Pectinesterase 49 336 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2114 Lja-Chr2 23452160 23453581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2114 42 351 Carbohydrate Esterase AT4G02330 56.075 1.32e-130 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2114 K01051 - twl:119984544 403.29