LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja2g2105	ATGTTTACATCTAGGAAGAAAATCCACAAGGATAAGGATGTCGAGCCAACTGAGTTTGAGGAAACAGTTGGACAGGCATTGTTTGATCTGGAAAACACTAACCATGAGCTGAAAAGTGAGCTGAAAGATTTATACATTAATTCAGCAGTCCAAATTGATGTTTCTGGCAACCGCAAGGCTGTGGTTATCCATATCCCCTACAGATTAAGGAAAGGCTTCCGGAAGATTCATCTCAAGCTTGTTAGGGAGCTTGAGAAGAAATTTAGCGGCAAGGATGTGATCCTGATTGCCACCCGGAGGATAGTGAGGCCACCAAAGAAAGGTTCTGCTGCTCAGCGTCCTCGCAGCCGCACACTCACAGCTGTGCATGAGGCAATGTTGGAGGATGTTGTGTTGCCTGCTGAGATTGTTGGGAAGCGTGTTAGGTACCGAGTTGATGGAACCAAGATTATGAAGGTGTTTTTGGACCCCAAGGAGCGAAACAACACTGAATACAAGCTGGAGACTTTTGCTGCGGTATACAGGAAATTTTCGGGCAAAGATGTTGTGTTTGAGTATCCTAATACCGAGGCTTAG	576	0.4549	MFTSRKKIHKDKDVEPTEFEETVGQALFDLENTNHELKSELKDLYINSAVQIDVSGNRKAVVIHIPYRLRKGFRKIHLKLVRELEKKFSGKDVILIATRRIVRPPKKGSAAQRPRSRTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGTKIMKVFLDPKERNNTEYKLETFAAVYRKFSGKDVVFEYPNTEA*	192

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja2g2105	191	Coils	Coil	27	47	-	-
	Lja2g2105	191	ProSitePatterns	Ribosomal protein S7e signature.	79	92	IPR000554	GO:0003735\|GO:0005840\|GO:0006412
	Lja2g2105	191	PANTHER	40S RIBOSOMAL PROTEIN S7	2	191	-	-
	Lja2g2105	191	PANTHER	40S RIBOSOMAL PROTEIN S7	2	191	IPR000554	GO:0003735\|GO:0005840\|GO:0006412
	Lja2g2105	191	Pfam	Ribosomal protein S7e	7	186	IPR000554	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja2g2105	Lja-Chr2	23314937	23317539	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja2g2105	1	191	Cytoplasmic Ribosomal Protein Gene Family	AT1G48830	78.534	1.01e-113	320

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja2g2105	K02993		-	gmx:100527642	355.14

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja2g2105	2	23314937	23317539	Lja4g0139	4	1060439	1062828	ECH
	Lja2g2105	2	23314937	23317539	Lja2g2105	2	23314937	23317539	ECH