Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2093 ATGAATACTCCATTTAACAACCATACTGCACCTAGAGATCTAGGTAGTTCAGGTGTAGATTCCAGTGGAATTAGCTCAACTCAGAGGAAGGTTTTGTCTGAATCAAAGTTTCAACGTGTTTTGCCTAGTCCAATTGCGGCAGAGCCACTAGGTGCATCAATTAACCAAGCAGGTCAAAAGTTCAATGAGGTGTTTCAACTAAAACAAGGAAGTTATGCAGATCTTCCAGCTTCAAAAATCACAGAATTGATGAAATCAACCAGTTTGGATCATTTATTGATGCAGAATGCTCCAACTCAATCTCTTCTGAGTGTTGTGAATGGTATCCTGGAAGAAAGTGTTGAGAGAAGAAATGGCGAAATACCCCATCGTGTGGCTTGCTTGTTGAGGAAAGTTGTCCAGGAGATTGAGCGGCGCATATCAACTCAAAATGAACATTTACGAACTCAAAAAAACCTTTATAAGGCGCGTGAAGATAAGTATCAATCAAGGATCAGAGTACTTGAGGCTCTTGCTTCTGGAACAAGGGAAGAGAGTGAGATTGAGAAGACTAAAATTGAAGAACAGAAGATACATGACACACTACAAACTAAGAAGGAAACCCAAAAGGATAACGAGGAGGATGAGAAAGAAGTTACTAAAATGATTAAGGAGCTAGAGGAAAAGACTATGGAAATTGAAACATTGAAGCAAGAACTAGACAACAAGGCAGATGAGAAAGAAGTTATTAGATTGATTAAAGAGCTAGAGGACAAGAATATGCAAGTAACTACATTGAAGCAAGAGCTAGAAACAATGAAAAAAGCATACCAAGTACAATGTTCACAGTTGGAAGCACAGGTTAACAATGTTAAAGGAGAACTACAACAGAAATCACAAGAATATGAGCATCAATTGGAAAACTTAAGAAATAAGGTTAAAGAGCATGAGGCCTCATCTGCGACAGAAGAGCTAGAGGACAAAAAGCTGGAAGTTACTACATTGAAGCAAGAACTAGAAACAATGAAAAAAACATATGAAGCACAATGTTCAAAGTTGCAAGCACAAGCCAACGATGCGAAAGGAGAACTGAAACAAAAATCGCAAGAATATGAGCATCAATTAGAAAAATTAAGAAATAAGGTTAAAGAGCACGAGACCTCTTCTTTGTTAAAATATCAGAAGTGGAACATGAAAGAGAACAAAATACAGAAATCTGTGAATTTTCAATTCGGCTCCATACAGAAATTGAAATTGTCTTGGGAGTCCATTAAGCAAGATGTTATGAAACAACAGAGGATATATGCAGAGGAATGTAATCGATTAGGTGGAAATCTTAAATCACTAGCAGAAGCAGCTGAGAGTTATCAATCAGTTCTTACAGAAAACCGAAAATTGTTTCATGAAGTTCAAGAATTAAAAGGAAATATCAGAGTATTCTGTCGAATCAGACCATTTCTTCCGGGACAAAAGGAAAAACAGTCTATTGTGGAACACATGGGTGAAACTGATTTGGTTGTGGCAAACCCCGCCAAACAAGGGAAAGAAGCTCTTAGAACATTCAAATTTAACAAGGTCTTTACTCCAGCCTCAACACAAGCTGAGGTGTATGCTGACATACAAGCCTTTATAAGAGCAGTGCTTGATGGGTTTAATGTATGTATCTTTGCTTATGGCCAAACAGGTTCAGGGAAAACCTACACAATGAGTGGTCCAAATGGTGCAACAAGTGAGAGTGTTGGTGTTAACTATCGAGCTCTGAATGACCTCTTCAGCATATCCTCTAGTAGAAAAAGCACCATAGTCTATGACATTGGGGTACAAATAATTGAGATATATAATGAACAAGTGCGAGATTTTTGGTTCATCACAATTTTTTTACATGTTGTCATGTTTATGACCTCTGATTTCCTTAACTTGCACACACTTGGGATATTGAACCACTCTCAACCAAATGGGTTAGCAGTACCTGATGCTAGCATGCAGCCTGTGAAATCAACAGCAGATGTCATAAGGCTAATGGACATTGGTCATAAAAATAGAGCCAAGGGTGCAACTGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTTTCAATTCATGTTCGTGGGTTGGACAAGAAGTCTGGTTCTTCTCTTCAAGGAAACCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGAGTTGATCGCTCTGAAGCAACTGGTGATAGGCTTAAGGAAGCACAGCATATTAACAAATCACTATCTGCTCTTGGAGATGTCATTTTTGCACTTGCTCAAAAGAGTGCTCATGTACCATACAGGAATAGCAAGCTTACTCAACTTTTGCAAACTTCTCTTGGCGGTAAAGCAAAGACACTCATGTTAGTCCAAATTAATTCAGACATAAAGTCTTATTCTGAATCCATGAGTACTTTGAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGCCGCGAAAAGTACCAAAGAGGGAAGAGACGTTAGAGAATTAATGGAGCAGGTGGCTTCTCTTAAAGACACTATTTTGACAAAGGATGAGGAGATTGAGCGGCTACAGTTACTTAAGGATCTGAAAAATGTTTATCCCAATGCCAACTCTGATTAA 2592 0.3858 MNTPFNNHTAPRDLGSSGVDSSGISSTQRKVLSESKFQRVLPSPIAAEPLGASINQAGQKFNEVFQLKQGSYADLPASKITELMKSTSLDHLLMQNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVVQEIERRISTQNEHLRTQKNLYKAREDKYQSRIRVLEALASGTREESEIEKTKIEEQKIHDTLQTKKETQKDNEEDEKEVTKMIKELEEKTMEIETLKQELDNKADEKEVIRLIKELEDKNMQVTTLKQELETMKKAYQVQCSQLEAQVNNVKGELQQKSQEYEHQLENLRNKVKEHEASSATEELEDKKLEVTTLKQELETMKKTYEAQCSKLQAQANDAKGELKQKSQEYEHQLEKLRNKVKEHETSSLLKYQKWNMKENKIQKSVNFQFGSIQKLKLSWESIKQDVMKQQRIYAEECNRLGGNLKSLAEAAESYQSVLTENRKLFHEVQELKGNIRVFCRIRPFLPGQKEKQSIVEHMGETDLVVANPAKQGKEALRTFKFNKVFTPASTQAEVYADIQAFIRAVLDGFNVCIFAYGQTGSGKTYTMSGPNGATSESVGVNYRALNDLFSISSSRKSTIVYDIGVQIIEIYNEQVRDFWFITIFLHVVMFMTSDFLNLHTLGILNHSQPNGLAVPDASMQPVKSTADVIRLMDIGHKNRAKGATAMNERSSRSHSVVSIHVRGLDKKSGSSLQGNLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSAHVPYRNSKLTQLLQTSLGGKAKTLMLVQINSDIKSYSESMSTLKFAERVSGVELGAAKSTKEGRDVRELMEQVASLKDTILTKDEEIERLQLLKDLKNVYPNANSD* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2093 863 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 322 851 - -
Lja2g2093 863 Gene3D - 238 278 - -
Lja2g2093 863 Gene3D - 207 237 - -
Lja2g2093 863 Gene3D - 304 347 - -
Lja2g2093 863 ProSiteProfiles Kinesin motor domain profile. 469 809 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2093 863 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 30 188 - -
Lja2g2093 863 Coils Coil 191 381 - -
Lja2g2093 863 Gene3D Kinesin motor domain 410 811 IPR036961 -
Lja2g2093 863 Coils Coil 823 843 - -
Lja2g2093 863 PANTHER KINESIN-LIKE PROTEIN KLP-3 322 851 - -
Lja2g2093 863 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 188 - -
Lja2g2093 863 MobiDBLite consensus disorder prediction 192 211 - -
Lja2g2093 863 Pfam Kinesin motor domain 475 807 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2093 863 MobiDBLite consensus disorder prediction 1 31 - -
Lja2g2093 863 SMART kinesin_4 467 817 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2093 863 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 235 316 - -
Lja2g2093 863 PANTHER KINESIN-LIKE PROTEIN KLP-3 235 316 - -
Lja2g2093 863 PRINTS Kinesin heavy chain signature 679 696 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2093 863 PRINTS Kinesin heavy chain signature 759 780 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2093 863 PRINTS Kinesin heavy chain signature 710 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2093 863 PRINTS Kinesin heavy chain signature 543 564 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja2g2093 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 469 847 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2093 Lja-Chr2 23134994 23140890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2093 239 843 Calmodulin-binding Proteins AT5G65930 28.864 1.41e-60 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2093 K10406 - gmx:100779403 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2093 2 23134994 23140890 Lja2g2093 2 23134994 23140890 ECH
Lja4g0147 4 1107540 1114668 Lja2g2093 2 23134994 23140890 PCT