Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2092 ATGTGTTCCTCTCCATTTAACAAAAAGATTCAAACCATGCGATTGAGTTGCAATGGTTGTCGTGTCCTCCGTAAAGGGTGCAGCCCCGATTGCCCCATTAGGCCCTGCCTCAACTGGATTGATTCCCCTGCTTCCCAGGCCAACGCTACCTTCTTCCTTGCCAAGTTCTATGGCCGTGCCGGCCTCCTCAACCTTCTCACTTCGGCACCTCAACAACTCCAACCAGCTGTTTTCAAATCTTTGCTCTACGAAGCTTGCGGTCGGATCGTGAACCCAATTTTCGGCTCAACCGGATTGCTCTCTACCGGGAGTTGGCACTTGTGCGAAGCTGCCGTCAATGCTGTTCTCATCGGCACACCAATTCAACAAGCTCTTTCCGACTCCTCGTGTGACATCTCTGCTAACCTGCAACTCCAAACATGCGATATACGCCACATGGCAAAGAGTGGACGATCATGCGACCTTGACCAGCTCCAAGGAGCAAAGACTCGCACCAGTCAGTTCAAGCGTCGAGCCAAGAAACCAAATTCGGTGTTGGAGAAGGGTGTGGTTGAGTTAGTGGCGGGTTGTTCTGGAAAAAATTTAGAAGGCTCAGTGAGTCGTGACTCGGAGTCTGGGGTGAGTGAGCATAGAAGCATTGGTGGGGAAGCTGATAGCAGATCATTTGAGTGTGTGGAGCCAGCTCGTGTTGATGATCAACAACTAGAGCTGGAGTTGACTTTAGGGTGGGGTTCAACGAAAATAAGTAGAGATGCTAGTTTAGCTTAG 768 0.5039 MCSSPFNKKIQTMRLSCNGCRVLRKGCSPDCPIRPCLNWIDSPASQANATFFLAKFYGRAGLLNLLTSAPQQLQPAVFKSLLYEACGRIVNPIFGSTGLLSTGSWHLCEAAVNAVLIGTPIQQALSDSSCDISANLQLQTCDIRHMAKSGRSCDLDQLQGAKTRTSQFKRRAKKPNSVLEKGVVELVAGCSGKNLEGSVSRDSESGVSEHRSIGGEADSRSFECVEPARVDDQQLELELTLGWGSTKISRDASLA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2092 255 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 13 212 - -
Lja2g2092 255 Pfam Lateral organ boundaries (LOB) domain 16 114 IPR004883 -
Lja2g2092 255 MobiDBLite consensus disorder prediction 196 220 - -
Lja2g2092 255 MobiDBLite consensus disorder prediction 203 220 - -
Lja2g2092 255 ProSiteProfiles LOB domain profile. 15 121 IPR004883 -
Lja2g2092 255 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 13 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2092 Lja-Chr2 23119616 23121366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2092 13 241 AS2 family AT3G02550 46.667 1.95e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lja2g2092 LOB 1.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2092 - - vun:114181255 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2092 2 23119616 23121366 Lja2g2092 2 23119616 23121366 ECH