Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2073 ATGCCTAAGTCAAGAGTCAAGATCATAAATACATATAAACCAAAAACTTCATCTTCTTTCAAGCAAGCAATCATGTTACCTGCAATACTCCTCTTAACATTCATCTTTATCCTATCAGCCACTCTATTTCATTCAAAACAACACCAAAACAATGGAAAAAATCCACCAGGTCCCAAGCCTCTTCCAATCATTGGCAGCCTCCACATGTTAGGAAAACTCCCGCATCGCTCCCTCCAAGCCCTTGCCAAAAAACACGGACCTATCATGTCCTTAAAGCTCGGACAGGTCCCAGCCATCGTGGCTTCTTCCCCTGAAGCTGTAGAGCTATTTCTCAAGACACACGACGCCGTTTTCGCTAGCCGGCCCAAAATCCAAGCTTCTGAGTTCATGTTCTATGGTGGAAAGGGATTGGGGTTGGCTCAGTATGGTCCTTACTGGCGTAACATGAGAAAACTGTGCACCTTGCAGCTTCTGAGTCCTTCAAAAGTCGAGATGTTTGCACCTTTGAGGAGTGAGGAATTGGGGAAGCTGTTGAGGACACTTGAGAAAGTTGCAGATTCAAGTGAAGTTGTGGATCTCAGTGAGTTGGTTGGGGAGGTTATAGCGAATATTACTTATAAGATGGTACTGGGATGCCATAAGGACAGTGGTGTTGATTTGAAGGGGCTTATTGGTGAGGCAATGAATTTGGCTGGGACTTTTAATTTGGCTGATTTTATACCTTGGCTAAGCATGTTTGATTTTCAGGGACTAGCAAGTCGAATGAAGAAAACAAGCAAGGCATTTGACCAAGTGGTAGACCAGATCATCAATGATCATGAGCATCCTTTAGAAAAGAAAGACCCTCAAGATAAGGACTTTGTGGACATATTACTATCACTAATGGACCCTCGGAACGAAGAACAGAATCAACTCATCGATAATACTAACATCAAATCCATCATATTGGACATGATTGGCGGGGCACTAGACTCAGCTTCAGCAACAATTGAATGGGCAATGTCAGAACTCTTAAGGAATCCAAGGGTGATGAAGAAACTTCAAGATGAGCTAGAAAATGTGGTGGGGATAAATAGACATGTGGATGAATCTGACTTAGAAAATTTGCGTTATTTGTACATGGTGGTGAAGGAGATCCTAAGATTATACCCTGCAGGACCTTTGCTAGGTCCTCGTGAGTGCCTAAAAGATGTTACCATTGATGGCTATTACATAAAGAAGAAGACACGGATCATCATTAATGCTTGGGCCATTGGGAGAGATCCTAAGGTTTGGTCGAATAATGCCGACATATTTTATCCAGAGAGATTTCTGAATTGCAATGTTGATCTTCGGGGACATGATTTTCAACTTATACCATTTAGTTCAGGTCGTAGAGGGTGCCCTGGGATTAATATGGGCCTTGTTATGGTTAGGCTAGTTGTGGCTCAATTGGTGCATTGCTTCAATTGGGAGCTTCCATTGGGGATTTCTCCTAATGATTTGGACATGACTGAGAGATTTGGACTTGCTATGCCAAGAAGTAACCATTTGCTAGCTATGCCAACTTGCCGCCTTGTTAAGCCATTAGTATTAGACTAA 1581 0.4263 MPKSRVKIINTYKPKTSSSFKQAIMLPAILLLTFIFILSATLFHSKQHQNNGKNPPGPKPLPIIGSLHMLGKLPHRSLQALAKKHGPIMSLKLGQVPAIVASSPEAVELFLKTHDAVFASRPKIQASEFMFYGGKGLGLAQYGPYWRNMRKLCTLQLLSPSKVEMFAPLRSEELGKLLRTLEKVADSSEVVDLSELVGEVIANITYKMVLGCHKDSGVDLKGLIGEAMNLAGTFNLADFIPWLSMFDFQGLASRMKKTSKAFDQVVDQIINDHEHPLEKKDPQDKDFVDILLSLMDPRNEEQNQLIDNTNIKSIILDMIGGALDSASATIEWAMSELLRNPRVMKKLQDELENVVGINRHVDESDLENLRYLYMVVKEILRLYPAGPLLGPRECLKDVTIDGYYIKKKTRIIINAWAIGRDPKVWSNNADIFYPERFLNCNVDLRGHDFQLIPFSSGRRGCPGINMGLVMVRLVVAQLVHCFNWELPLGISPNDLDMTERFGLAMPRSNHLLAMPTCRLVKPLVLD* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2073 526 Gene3D Cytochrome P450 41 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2073 526 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2073 526 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2073 526 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2073 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Lja2g2073 526 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2073 526 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2073 526 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2073 526 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2073 526 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2073 526 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2073 526 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2073 526 PANTHER CYTOCHROME P450 93A3-LIKE 28 520 - -
Lja2g2073 526 PANTHER CYTOCHROME P450 FAMILY PROTEIN 28 520 - -
Lja2g2073 526 Pfam Cytochrome P450 55 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2073 526 SUPERFAMILY Cytochrome P450 55 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2073 Lja-Chr2 22832491 22835121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2073 23 520 Cytochrome P450 AT5G07990 38.780 4.85e-124 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2073 - - aprc:113866792 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2073 2 22832491 22835121 Lja2g2073 2 22832491 22835121 ECH
Lja4g0152 4 1167075 1168776 Lja2g2073 2 22832491 22835121 PCT