Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2071 ATGCACCATCTAGATCGAATCCCCTGTCCCACCAAGCCCATCATCAATCAAAGACCAAAAACACCTCAAGATTATAAAATATCCAAACCCGTCTCTCTTATCTTCAAGCCAACAAATCCTGAAACGTTTCCACAAACCATGGCCATCCTTGCAATACTCCTTGTAACATTCCTTATAACTCTATCCTTAGCTCTGTTCCTCCATCCAAAACAGAGTCAACATGATAGGAAACACAAACACAAACACCCTCCAGGTCCCAAACCTCTTCCAATCATTGGCAACCTCCACATGCTAGGAAAACTCCCCCATCGCTCCCTCCAAGTCCTTGCCAAAAAATATGGACCTATCATGTCCTTGAAGCTAGGACAGGTCCCAGCCATCGTGGCTTCTTCCCCTGAAGCTGCAAAGCTATTCCTCAAGACACACGACACCATTTTCGCTAGCAGGCCCATAATCCAAGCTTCTGAGTACTTATCTTATGGCAGTAAAGGCTTGGCGTTCTCTGAGTATGGTCCCTACTGGCGCAACGTGAAAAAGGTCTGCACCACACAGCTTCTGAGTGGATCCAAAGTTGAGAGCTTTGCTCCTTTAAGAAAGGAAGAGATGGGATTGCTTGTGAAGTTGCTTGTGGAATCTGGAGAGTCAGGGGAAGTTGTGGATGTCAGTGAAAAGGTTGCGAAGCTTATTGAGAATATAGTGTTTAGAATGATTCTGGGTCGCAGTAACGATGATAGGTTCGACCTCAAGGGGATTGTTCACGAGGCTGTGCACTTGGTTGGAAATTTTAACCTGGGAGATTATGTACATTTGGCTGGTGCCTTGGACCTTATGGGACAAGTAAGAAAATTCAAGAAAATAAGCAAGGCATATGACCAAGTGGTGGAACATATCATCAAAGATCATGAGGCTTCTTCTGATTATAACAGCAAGCATTACATGGACTTCGTGGACATATTACTATCACATATGAACCAACCAAAAGACCCTCAAAACGAACACACACATATCATCGACAGAACCAACATCAAGGCAATTATATTGGACATGATTGTAGGAGCATATGACACCTCTGTTACCGCAGTTGAGTGGGCCATGTCAGAACTCTTAAGGCACCCAAGGGTAATGAAGAAGCTTCAAGATGAGTTGATGAGTGTAGTGGGGGAAAATAGACAAGTAGAGGAAGCTGATTTGGTTGAATTGAATTACCTCAATATAGTGGTGAAAGAAACTTTAAGGTTGTACCCTGTTGGTCCTTTATTAGTGCCTCGTGAGTCTCAAGAAGATGTTACTATCAATGGTTATTTCATACCAAAAAAGACAAGGGTTTTGGTCAATGCTTGGGCAATAGGAAGAGATCCTGAAATTTGGTCAGAGAATGCTGAGGTTTTTTATCCTGAAAGATTTGAAAATAGTGATATTGATCTTTGTGGGCAGTATTTTCAACTTATACCATTTGGTTCTGGTCGTAGAGGGTGTCCTGGGGTGTCATTGGCTTTAATTACAGTTGGATTTGTTCTAGCTCAGTTAGTGCATTGCTTCAATTGGAAGCTTCCACTGGGTATGTCTCCCGACGAATTGGAAATGACTGAGAATTTTGGACTTTCAATTCCAAGAAGTAAGCATTTATTAGCTGTTCCAACTTATCGGTTGTTCAATAAAGCTTGA 1665 0.424 MHHLDRIPCPTKPIINQRPKTPQDYKISKPVSLIFKPTNPETFPQTMAILAILLVTFLITLSLALFLHPKQSQHDRKHKHKHPPGPKPLPIIGNLHMLGKLPHRSLQVLAKKYGPIMSLKLGQVPAIVASSPEAAKLFLKTHDTIFASRPIIQASEYLSYGSKGLAFSEYGPYWRNVKKVCTTQLLSGSKVESFAPLRKEEMGLLVKLLVESGESGEVVDVSEKVAKLIENIVFRMILGRSNDDRFDLKGIVHEAVHLVGNFNLGDYVHLAGALDLMGQVRKFKKISKAYDQVVEHIIKDHEASSDYNSKHYMDFVDILLSHMNQPKDPQNEHTHIIDRTNIKAIILDMIVGAYDTSVTAVEWAMSELLRHPRVMKKLQDELMSVVGENRQVEEADLVELNYLNIVVKETLRLYPVGPLLVPRESQEDVTINGYFIPKKTRVLVNAWAIGRDPEIWSENAEVFYPERFENSDIDLCGQYFQLIPFGSGRRGCPGVSLALITVGFVLAQLVHCFNWKLPLGMSPDELEMTENFGLSIPRSKHLLAVPTYRLFNKA* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2071 554 Coils Coil 375 395 - -
Lja2g2071 554 Gene3D Cytochrome P450 68 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PRINTS P450 superfamily signature 492 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PRINTS P450 superfamily signature 483 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PRINTS P450 superfamily signature 352 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 MobiDBLite consensus disorder prediction 1 21 - -
Lja2g2071 554 PANTHER CYTOCHROME P450 93A3-LIKE 49 551 - -
Lja2g2071 554 SUPERFAMILY Cytochrome P450 83 548 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PRINTS E-class P450 group I signature 404 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PRINTS E-class P450 group I signature 445 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PRINTS E-class P450 group I signature 134 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PRINTS E-class P450 group I signature 492 515 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PRINTS E-class P450 group I signature 341 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PRINTS E-class P450 group I signature 482 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PRINTS E-class P450 group I signature 361 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 PANTHER CYTOCHROME P450 FAMILY PROTEIN 49 551 - -
Lja2g2071 554 Pfam Cytochrome P450 83 539 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja2g2071 554 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 485 494 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2071 Lja-Chr2 22799508 22802196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2071 73 550 Cytochrome P450 AT5G57260 40.688 1.12e-125 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2071 - - lja:Lj0g3v0092679.1 1084.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2071 2 22799508 22802196 Lja2g2071 2 22799508 22802196 ECH