Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2052 ATGGGGAAGAAAGCAGCGTGTTGGTGTTCCAATCTTTTGATTCTTTACCCTATTCTGTTAATAGCCGTCACAGTCACATTCTCCGCCACTTCCTCCGCCGCACACAGAGTCTCCGATGGCGGCCTCACAGACGCCGAAGCCATGTACATTAAGCAGCGTCAGCTTCTGTACTATAGAGATGAGTTCGGTGACAGAGGTGAGAAGGTCACGGTGGACCCGTCGTTGGTGTTCGAGAACAACCGCATCAGAAACGCTTACATAGCTTTACAAGCTTGGAAGGAAGCCATTCTCTCCGATCCCAGGAACTACACTGTTAACTGGGTTGGGGCTGATGTTTGTAGCTATAGCGGTGTTTTCTGTGCTCCCGCGCCGGATAATCCTAAGATCCGGACGGTTGCCGGCATTGACCTCAACCACGGTGACATTGCCGGGTATTTGCCGGAGGAGCTGGGTTTGCTCACAGATCTTGCGCTGTTCCACATCAATAGTAACAGATTCTGCGGTACGGTTCCGCATAAGTTTGATAGGCTCAAGATCTTGTTTGAGTTGGACCTGAGTAACAACAGATTCGCCGGGAAGTTTCCGGCGGTGGTGCTGCGGTTGCCGGAGCTGAAGTTTCTAGATCTGAGGTTTAATGAGTTTGAAGGGACGGTGCCGAAGGAGCTGTTTGATAAGGACTTGGATGCGATATTCATCAACAGTAACAGGTTCGTGTTTGATTTGCCGGATAATTTTGGAAACTCGCCGGTGTCGGTGATTGTTCTGGCGGATAACAAGTTCCACGGTTGTGTGCCGGCGGGGATCGGGAACATGACAAGGCTGAATGAGATTATTCTGATGAATAATGGGTTTAGGTCTTGTTTGCCGGAGGAGCTGGGTTTGTTGAAGAATCTCACGGTGTTTGATATTAGTTACAACCAGCTTTTGGGGCCGTTGCCGGCGGCGATTGGTGGCGCGGTGAGTTTGGAACAGCTTAATGTGGCTCACAATTTGCTCTCCGGGAAGATTCCGGAGACGATTTGTGCGCTGCCGAATTTGCAGAACTTTACTTACTCTTACAATTTCTTCACTGGTGAGCCTCCGAAGTGTTTGGCCTTGCCGGCGTTTGATGACCGGAGAAACTGCTTGCCGGCGAGACCGGTTCAGCGCTCCGCCGCGCAATGTAAGTCGTTTTTGTCTCACCCTGTTGATTGTAAGTCGTTTAGGTGTAAGCCTTTTGTTCCTTCACTGCCTTCACCACCACCTGCCCCTGTTTTTCAATCCCCTCCACCGCCAGTTGCATCACCACCACCACCGTCACCGGTGTCTTTGCCGCCACCAGTTTTCTCTCCACCACCGGTTTATTCCCCACCTCCACCTCCTCCACCGCCACCACCTCCCCCACCGGTGTCCTCCCCACCTCCGCCACCACCTTCCCCACCACCGCCTTCTCCTCCACCTCCATCACCTCCACCACCGGTTTACTCCCCACCACCGCCTCCTCCACCAGTGTACTCTCCACCACCTCCCCCACCTTCACCGCCTCCTCCTTCCCCTCCACCACCGCCTCCTCCAGTCTACTCTCCACCTCCTCCCCCACCTTCACCACCTCCCCCTGTCTATTCTCCACCTCCTCCCCCACCTTCACCTTCACCACCGCCACCCTCACCACCGCCTCCTGTGATGTCACCACCTCCACCACCACCACCCTCTCCAATTCCACCACCATACTGTGTCCACTCTCCACCACCACCACCACCAAATTCACCACCACCACCACCTCCACCAGCTCCTGTATTCTCCCCACCTCCACCTGTGCCTTACTACTACAACTCACCGCCACCACCATCACCATCACCGCCACCACCTCATCATTCACCACCACCCCCACCACCAACGCCCTCTCCACCAATCTATCCCTATTTATCACCCCCACCACCTCCTCCTGTCCACTCTCCCCCACCACCAGTCCATTCACCACCCCCACCATCTCCCCCACCTTGTATAGAACCCCCACCACCACCACCACCATCATCTCCACCACCATGTGAAGAACACTCACCTCCACCACCCTCACCACACCCTGCACCTTACCTGCCACCACCTTCCCCAGTTCATTATACACCACCAGCCTATGTTTCTCCTCCACCACCACCAGCCTATGTTTATGCTTCACCACCACCCCCAGTTCATTATCAACCACCACCTGCCCCTGTATATGAAGGGCCTTTACCACCTGTGGTCAGCATCTCGTACGCTTCTCCTCCCCCACCACCCTTCTATTGA 2265 0.5466 MGKKAACWCSNLLILYPILLIAVTVTFSATSSAAHRVSDGGLTDAEAMYIKQRQLLYYRDEFGDRGEKVTVDPSLVFENNRIRNAYIALQAWKEAILSDPRNYTVNWVGADVCSYSGVFCAPAPDNPKIRTVAGIDLNHGDIAGYLPEELGLLTDLALFHINSNRFCGTVPHKFDRLKILFELDLSNNRFAGKFPAVVLRLPELKFLDLRFNEFEGTVPKELFDKDLDAIFINSNRFVFDLPDNFGNSPVSVIVLADNKFHGCVPAGIGNMTRLNEIILMNNGFRSCLPEELGLLKNLTVFDISYNQLLGPLPAAIGGAVSLEQLNVAHNLLSGKIPETICALPNLQNFTYSYNFFTGEPPKCLALPAFDDRRNCLPARPVQRSAAQCKSFLSHPVDCKSFRCKPFVPSLPSPPPAPVFQSPPPPVASPPPPSPVSLPPPVFSPPPVYSPPPPPPPPPPPPPVSSPPPPPPSPPPPSPPPPSPPPPVYSPPPPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPVYSPPPPPPSPSPPPPSPPPPVMSPPPPPPPSPIPPPYCVHSPPPPPPNSPPPPPPPAPVFSPPPPVPYYYNSPPPPSPSPPPPHHSPPPPPPTPSPPIYPYLSPPPPPPVHSPPPPVHSPPPPSPPPCIEPPPPPPPSSPPPCEEHSPPPPSPHPAPYLPPPSPVHYTPPAYVSPPPPPAYVYASPPPPVHYQPPPAPVYEGPLPPVVSISYASPPPPPFY* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2052 754 SUPERFAMILY L domain-like 87 367 - -
Lja2g2052 754 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 20 498 - -
Lja2g2052 754 MobiDBLite consensus disorder prediction 415 435 - -
Lja2g2052 754 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 498 - -
Lja2g2052 754 MobiDBLite consensus disorder prediction 607 693 - -
Lja2g2052 754 Gene3D Ribonuclease Inhibitor 250 377 IPR032675 -
Lja2g2052 754 MobiDBLite consensus disorder prediction 447 559 - -
Lja2g2052 754 Gene3D Ribonuclease Inhibitor 86 249 IPR032675 -
Lja2g2052 754 PRINTS Proline rich extensin signature 455 471 - -
Lja2g2052 754 PRINTS Proline rich extensin signature 422 434 - -
Lja2g2052 754 PRINTS Proline rich extensin signature 434 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2052 Lja-Chr2 22449893 22452464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2052 18 403 Trihelix Transcription Factor Family AT4G18670 72.868 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2052 - - lja:Lj0g3v0088499.1 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2052 2 22449893 22452464 Lja2g2052 2 22449893 22452464 ECH