Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2049 ATGGACGACATGGAAGATGATGCGAGGTACCCTCCCAAGTCCTTCCCGTTGAGCCGTCAAAACCCCTCTTCCCATCGCCACAAGCACCCAAATCGAGCTGCACCATTCCACCATCGCCCACCCACCACTCGCTACAAGGTGGATGAAGAAGACGACGAGGAATTCGAGGACGCTAAGGAATTCGACGATTACAACGACGATGACGACGCACCGGAAAATGGGTATGCTGGGAATTTCGAAGAGGATGATGGGTTTGCCAGGAAGAAGAGGAAGCTACGAGGTGGTCCCTCCAACTATGAGTTCGCGCCACGGGCGAAGTTCCCATTCGGGAATCGCGGTGGTTCTTCCTCCGCGGCGGAGGAATGGACGGAGCATGCGACGCTTGTGCTGTTGGAGGTGTGGGGGGATAAGTTTCTTCAAATTGGGAGGAACAGTTTGAGGTCAGAGGAGTGGCATGAGGTTGCTGAGAAGGTTTCTGATGAGTTGAAGGTGGAAAGGACGGTGGCGCAATGCATGAGTGTTTTGGATAAGCTGAAAAGGAGGTATAAGAAAGAGAAGGCTAGAATTGATGAGATGGGTGTGGGTGTGAGTTCTTGTAAGTGGCCATTTTTCAAGAAGATGGATATGTTGATGGCTTCATCTGCAAGGCAAGAGTATGGACTGGCTTGTGGGGTTGATTCTGGTGAGTATGTGTTCATGAATACTAGGGTGTATTTGAATAGGTCCAATGGGTTTGATGAGATGAGGGATAGTCCTGGTGAGTCTGAGACCTCTGAGGAGAATGATTCTGATGGAGTTGCCGCGGGGCCAGGTGGCGATGGTGATGAGGAGGACGACGAGACTTCCTATAGGGTGTTGGCTGATTCTATTCAGAAGTTTGGGAAAATATATGAGAAGATTGAGAACACTAAGAGGCAGCAGATGATGGAGTTGGAGAAGATGAGGTTGGATTTTAACAGGGAGTTGGAGTTGCAGAAGAAGCAGATTTTGGAAAGGGCTGAGGCTGAAATTGCAAAGATGCAGGAAGTGGATGAGGATGAGACAGACTCTTCTACAGAGAATCTCAGTGAATAA 1074 0.4944 MDDMEDDARYPPKSFPLSRQNPSSHRHKHPNRAAPFHHRPPTTRYKVDEEDDEEFEDAKEFDDYNDDDDAPENGYAGNFEEDDGFARKKRKLRGGPSNYEFAPRAKFPFGNRGGSSSAAEEWTEHATLVLLEVWGDKFLQIGRNSLRSEEWHEVAEKVSDELKVERTVAQCMSVLDKLKRRYKKEKARIDEMGVGVSSCKWPFFKKMDMLMASSARQEYGLACGVDSGEYVFMNTRVYLNRSNGFDEMRDSPGESETSEENDSDGVAAGPGGDGDEEDDETSYRVLADSIQKFGKIYEKIENTKRQQMMELEKMRLDFNRELELQKKQILERAEAEIAKMQEVDEDETDSSTENLSE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2049 357 MobiDBLite consensus disorder prediction 338 357 - -
Lja2g2049 357 MobiDBLite consensus disorder prediction 1 94 - -
Lja2g2049 357 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 41 351 - -
Lja2g2049 357 MobiDBLite consensus disorder prediction 244 281 - -
Lja2g2049 357 MobiDBLite consensus disorder prediction 340 357 - -
Lja2g2049 357 Coils Coil 297 350 - -
Lja2g2049 357 Gene3D - 122 184 - -
Lja2g2049 357 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 41 351 IPR044823 -
Lja2g2049 357 Pfam Myb/SANT-like DNA-binding domain 120 209 IPR044822 -
Lja2g2049 357 MobiDBLite consensus disorder prediction 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2049 Lja-Chr2 22288438 22297879 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2049 273 342 Trihelix Transcription Factor Family AT3G14180 40.000 1.03e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lja2g2049 Myb_DNA-bind_4 1.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2049 - - gmx:100790166 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2049 2 22288438 22297879 Lja2g2049 2 22288438 22297879 ECH