Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2017 ATGTCCGCCGCACCAGCACCATCTTCGCCGCCGTCAACCCCGGCCGCACCACCACCTACAACACCCTCCGCGCCCCCTCCTGCTACGCCTTCATCGCCTCCGCCGGCCACTCCCTCTGCTCCGCCGCCGGCAACCCCCTCTGCGCCGCCGCCGGCTACACCCTCATCATCGCCGCCGCCGGCTACTCCCTCGTTGTCTCCACCTTCGCCTTCTCCTCCGGCTCCTACTACGCCGGAGGCTTCTCCACCGTCGACATCTACGCCGGGCGGCGGCACTACTCCGAGTCCACCGTCTCGTAGCTCTCCCTCCCCTCCTCCTCCGACGAGTACTGGTAAAACGCCATCATCGCCGCCTCCGCCGGCGTCCAGGTCTTCTCCTTCTCCTTCACCTCCTTCGTCGTCGTCGAGCATTTCGACCGGTGTCGTCGTCGGGATCGCCGTTGGGGCAGTGGCGATTCTCTTGGTGTTGAGCCTTCTCTGCATATGCTTTAGGAAGAAGAAGAGAAGACGTGATGAGGAGTACTATGTTCCTCCGCCGCCGCAGCAACAACAACCATGGGGACCCAAAAATGAACCGTATGGTGGCCCTCCACGTAACTGGCAACACAATGCTCCCCCTCCTTCAGATCATGTAGTCTCAATGATGCCTCCGAAGCCATCACCTCCAGTTCCTCCCCCTGTTGCTTCACGACCGCCATCCAATTCATCTTCGTCACTTTACTCTGCACAACCGCCACCGCCTCCTCCTTTCATGAACAGCAGTGGAGGGTCTGGATCAAACTATTCTGGTGGTGAACCACTTCCACCTCCTTCTCCAGGCATGTCATTGGGATTCTCGAAGAGCGCATTTACATACGAGGAGTTGGCTCGGGCAACGGATGGCTTCACCGATGCCAACCTCCTTGGATCAGGTGGATTTGGATACGTGCACAGAGGAATCCTCCCCAATGGCAAGGAGGTTGCTGTGAAGCAGCTGAAGGCTGGAAGTGGGCAAGGGGAGCGTGAATTTCAAGCTGAAGTCGAGATTATTAGCCGTGTTCATCACAAACATCTTGTCTCTTTGGTTGGATACTGCAGCACTGGGGCCCAGAGGCTCCTTGTTTATGAATTTGTCCCCAACAATACAATGGAATTCCATTTACACGGAAAAGGGCGGCCTACCATGGATTGGCCCACGAGACTACGAATTGCTTTGGGATCTGCAAAAGGGCTTGCATATCTTCATGAAGATTGTCACCCTAAGATCATCCATCGCGATATTAAAGCTGCTAACATCCTTCTGGATTTCAAGTTTGAAGCAAAGGTTGCAGATTTTGGTCTAGCGAAGTTTTCTTCTGACCTCAACACTCATGTTTCTACGCGAGTGATGGGAACTTTTGGGTATCTGGCTCCAGAATATGCTGCCAGTGGAAAACTTACAGACAAATCGGATGTTTTCTCCTATGGAGTCATGCTCCTTGAGTTAATAACTGGACGGCGACCAGTTGATAAAAATCAAACTTACCAGGACGATAGTTTGGTAGAATGGGCTAGGCCTTTGCTCACACGTGCTTTGGAAGAGGATGATTTTGATTCTCTTATTGACCCGAGGATCCAGAATGAATATGATCCTAATGAGATGCTTCGTATGGTAGCATGTGCTGCATCTTGCACACGTCATTCAGCTAAGCGTCGACCAAGGATGAGCCAGGTCGTTCGTGCTCTGGAAGGAGATGTGTCTCTATCAGATCTTAATGAAGGAATAAGACCTGGACACAGCACTGTCTACAGTTCTCATGAAAGCTCAGATTATGATACTTCACAATACAAGGAAGACATGAAGAAGTTCAGAAAAATGGCATTGGGAACTCAGGATTATGGTGCCAGCAGTGAGTACAGTGCGGCTACGAGCGAGTACGGTTTAAACCCATCCGGCTCAAGCAGCGAAGCCCAGAGCCTCCAGCACACACGGGAAATGGAAATGAGAAAGTTGAAGAACAGTCAAGGTTTCAGTGGAAGCTCTTGA 2004 0.524 MSAAPAPSSPPSTPAAPPPTTPSAPPPATPSSPPPATPSAPPPATPSAPPPATPSSSPPPATPSLSPPSPSPPAPTTPEASPPSTSTPGGGTTPSPPSRSSPSPPPPTSTGKTPSSPPPPASRSSPSPSPPSSSSSISTGVVVGIAVGAVAILLVLSLLCICFRKKKRRRDEEYYVPPPPQQQQPWGPKNEPYGGPPRNWQHNAPPPSDHVVSMMPPKPSPPVPPPVASRPPSNSSSSLYSAQPPPPPPFMNSSGGSGSNYSGGEPLPPPSPGMSLGFSKSAFTYEELARATDGFTDANLLGSGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCSTGAQRLLVYEFVPNNTMEFHLHGKGRPTMDWPTRLRIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFSSDLNTHVSTRVMGTFGYLAPEYAASGKLTDKSDVFSYGVMLLELITGRRPVDKNQTYQDDSLVEWARPLLTRALEEDDFDSLIDPRIQNEYDPNEMLRMVACAASCTRHSAKRRPRMSQVVRALEGDVSLSDLNEGIRPGHSTVYSSHESSDYDTSQYKEDMKKFRKMALGTQDYGASSEYSAATSEYGLNPSGSSSEAQSLQHTREMEMRKLKNSQGFSGSS* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2017 667 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 33 651 - -
Lja2g2017 667 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 33 651 - -
Lja2g2017 667 MobiDBLite consensus disorder prediction 173 275 - -
Lja2g2017 667 Gene3D Phosphorylase Kinase; domain 1 277 370 - -
Lja2g2017 667 Gene3D Transferase(Phosphotransferase) domain 1 371 579 - -
Lja2g2017 667 MobiDBLite consensus disorder prediction 1 138 - -
Lja2g2017 667 MobiDBLite consensus disorder prediction 210 231 - -
Lja2g2017 667 ProSiteProfiles Protein kinase domain profile. 295 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2017 667 SMART serkin_6 295 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g2017 667 MobiDBLite consensus disorder prediction 7 82 - -
Lja2g2017 667 MobiDBLite consensus disorder prediction 178 192 - -
Lja2g2017 667 SUPERFAMILY Protein kinase-like (PK-like) 269 568 IPR011009 -
Lja2g2017 667 MobiDBLite consensus disorder prediction 625 667 - -
Lja2g2017 667 MobiDBLite consensus disorder prediction 625 647 - -
Lja2g2017 667 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Lja2g2017 667 PRINTS Proline rich extensin signature 35 51 - -
Lja2g2017 667 PRINTS Proline rich extensin signature 55 72 - -
Lja2g2017 667 PRINTS Proline rich extensin signature 14 35 - -
Lja2g2017 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
Lja2g2017 667 Pfam Protein tyrosine and serine/threonine kinase 299 568 IPR001245 GO:0004672|GO:0006468
Lja2g2017 667 MobiDBLite consensus disorder prediction 95 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2017 Lja-Chr2 21453716 21457877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2017 104 650 Trihelix Transcription Factor Family AT1G70460 49.002 6.15e-173 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lja2g2017 PK_Tyr_Ser-Thr 8.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2017 - - gmx:100781944 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2017 2 21453716 21457877 Lja2g2017 2 21453716 21457877 ECH