Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2016 ATGGCCATCATCGACCATCATCGCTCCCTCTTCTCCCTCCTCATTCTCTTCATCACCCTCTTCCGAACCCTAACCCCAAATCCTTCACCACCACTTTCCAACTACATCGTCGGCTTCACGGAATACAAGAGCGCCGAGCACCACCGCGCGTATTTGGAATCGAGTCTATGCTCCAAAGGGTGGCGGTGGATCGAGCGGCGGAACCCGGCGGCGAAGTATCCGACTGATTTTGGTGTTGTTTCGATCGGGGAATTGGGGGTGGTTGAGGAGATTCAGAAATTGGGGTTGGTGAAGTATGTGAGCTTGGATATGAGCTATACGAGGGGTTTGATGAAGCTTGATAGAGGTGAGGTTGGTGGTTCCTTTGTTGATGGGAACAAGCGCCCTGGGAAGATCTTCACCAAGATGTCGTTTTGTGAGGCAGAAGAAGAAGATGAAGATTTCAGCAATCGCAACAATTCTATTAACTTGGGGCGACAATTGTTGATGCAGAGATCACAAGTTACTTCCATGTTTGGAGCAGAAGATCTTTGGAAGAAAGGGTATACTGGTGTGAAGGTCAAGATGGCCATATTTGATACTGGTATTCGAGCTGATCACCCACATTTTCGTAACATTAAGGAGCGGACAAATTGGACCAATGAGGATACGTTGAATGATAATCTTGGACATGGGACTTTTGTTGCTGGTGTCGTTGCTGGTGTGGATACGGAGTGCCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGTGTGTTCACTGATGCTCAGGTATCATATACATCATGGTTCCTTGATGCCTTCAACTATGCTATTGCAACCGATATGGATGTGCTTAATTTGAGCATAGGTGGACCTGATTACTTGGATCTCCCATTTGTGGAAAAGATATGGGAGATAACAGCAAATAACATAATCATGGTTTCTGCTATTGGAAATGATGGACCACTTTATGGAACTTTGAACAATCCAGCTGATCAAAGTGATGTCATTGGTGTCGGTGGTATTGACTATAGTGACCATATAGCCTCCTTTTCCTCACGTGGCATGAGTACCTGGGAAATTCCTCATGGTTACGGCCGTGTGAAGCCAGATATTGTTGCTTATGGACGGGACATTATGGGATCAAAGATTAGTTCGGGTTGTAAAAGTTTATCAGGAACCAGTGTTGCTAGTCCTGTAGTTGCTGGTGTTGTATGTTTGCTTGTGAGCGTCATTCCTGAACCCGATCGAAAAAATATTTTAAACCCAGCAAGCATGAAACAAGCATTGGTTGAGGGTGCTGCAAAGCTGGCTGGGCCTAACATGTATGAGCAGGGTGCTGGCAGAGTCGATCTGTTAAAATCATATGAGATTCTCAAGAGCTATAAACCTAGGGCGAGCATCTTTCCCAGTATTCTTGATTATACAGATTGTCCTTACTCATGGCCCTTTTGTCGTCAGCCACTATATGCTGGTGCTATGCCTGTCATCTTCAATGCTACCATTTTGAATGGAATGGGTGTTATTGGCTATGTTGAAGGTCCACCAACATGGCATCCTTCAGAAGAAGATGGGAATCTTCTTAGCATTCATTTTACATATTCTCAGATTGTCTGGCCTTGGACTGGTTATTTGGCCCTTCACATGCAAATCAAGGAAGAAGGTGCGCAGTTCTCTGGAACGATTGAAGGTAATGTGACTCTCAAGGTTTCTAGTCCTCCAGGTCAAGGGGAGAAGGGCCCACGGACTAGCATCTGTGTGCTTCAATTAAAGTTAAAAGTTGTGCCAACACCGCCACGATCAAAACGAGTTTTGTGGGATCAGTTTCACAATATCAAATATCCTCCAGGTTATATTCCCAGAGATTCCTTGGATGTTCGTAGTGACATTCTTGACTGGCATGGAGATCATCTGCATACAAATTTTCACATCATGTTCAACATGTTAAGAGATGCTGGTTACTTTGTTGAAACCCTTGGTTCTCCTCTTACATGTTTTAATGCTCGACAGTATGGAACACTTCTGTTGGTGGATCTTGAGGATGAGTACTTTGCTGAGGAGATTGAAAAGCTGAGAGATGATGTTGTTAATACTGGATTGGGATTAGCTGTGTTTGCGGAGTGGTACAATGTAGATACCATGGTAAAGATGAGATTCTTTGATGACAATACCCGGAGCTGGTGGACCCCAGTCACTGGAGGTGCTAATATTCCTGCACTTAATGATCTTTTGGCTCCATTTCGAATTGCTTTTGGAGATAAGATTCTGAATGGTGATTTTCCACTATTGGGTGAGCAGAATCGATACGCATCTGGAACAGATATAGTGAGGTTTCCTAGTGGTGGTTATGTACATAGCTTTCCTTTCTTGGATAGTTCAGAAAGTGGGGCCACTCAGAATGTGTTGCAGACATCTGGCACTACCAAGGCCGATTCTCCAATTCTTGGTCTCACAGCAATGGGTGAAGGTCGTATAGCTGTATATGGGGACTCCAACTGTTTGGACAGCAGCCATATGGTTACGAACTGTTTTAGACTTCTGAAGAAAATACTAGATTTTACTAGCGAGGGTGTTAGAGATCCAGTGCTTTTCTCTGATTCAAACAAAAAAGATACTCCCTTATATGAAGATGAAAACCAGTTACCATCCCGCAGAACTGATGTGAATTTCTCTGCATATTCAGCTGTCGTGGGGAAGGAATTGATCTGCAGGACTGACACAAGGTTTGAGATCTGGGGAACCAAGGGCTACAGTTTGCAAGTCAGAGGACGAAACAGAAAATTGCCCGGTTACCCTGTCATTGATTTGGGGAATGGTTTCAATTCATCCTCTGATAATTCTAACAACATTAGGCGTCCGGAGTTAACTGTGAGAAATAAGGATGGCCCTCCGGGGAACCGGTATCTGGGCCTGTTCTATGGAGATGAGCTTGATGCACCTATGCTGGTTGGTAGTCACTGGCTTTATCCTGCTGTTTTTGCAGCAACCGGTATTTTGTTGTTGAGTTTTTGGCGTATTCGCCAAAGGAGACGTCGACGAAGGAAAGGAGCAAGCTCTTCTGGTAGATTAGCAGCCAATTTATTATAG 3072 0.4437 MAIIDHHRSLFSLLILFITLFRTLTPNPSPPLSNYIVGFTEYKSAEHHRAYLESSLCSKGWRWIERRNPAAKYPTDFGVVSIGELGVVEEIQKLGLVKYVSLDMSYTRGLMKLDRGEVGGSFVDGNKRPGKIFTKMSFCEAEEEDEDFSNRNNSINLGRQLLMQRSQVTSMFGAEDLWKKGYTGVKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVVAGVDTECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATDMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWEIPHGYGRVKPDIVAYGRDIMGSKISSGCKSLSGTSVASPVVAGVVCLLVSVIPEPDRKNILNPASMKQALVEGAAKLAGPNMYEQGAGRVDLLKSYEILKSYKPRASIFPSILDYTDCPYSWPFCRQPLYAGAMPVIFNATILNGMGVIGYVEGPPTWHPSEEDGNLLSIHFTYSQIVWPWTGYLALHMQIKEEGAQFSGTIEGNVTLKVSSPPGQGEKGPRTSICVLQLKLKVVPTPPRSKRVLWDQFHNIKYPPGYIPRDSLDVRSDILDWHGDHLHTNFHIMFNMLRDAGYFVETLGSPLTCFNARQYGTLLLVDLEDEYFAEEIEKLRDDVVNTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFRIAFGDKILNGDFPLLGEQNRYASGTDIVRFPSGGYVHSFPFLDSSESGATQNVLQTSGTTKADSPILGLTAMGEGRIAVYGDSNCLDSSHMVTNCFRLLKKILDFTSEGVRDPVLFSDSNKKDTPLYEDENQLPSRRTDVNFSAYSAVVGKELICRTDTRFEIWGTKGYSLQVRGRNRKLPGYPVIDLGNGFNSSSDNSNNIRRPELTVRNKDGPPGNRYLGLFYGDELDAPMLVGSHWLYPAVFAATGILLLSFWRIRQRRRRRRKGASSSGRLAANLL* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2016 1023 ProSitePatterns Serine proteases, subtilase family, serine active site. 388 398 IPR023828 -
Lja2g2016 1023 Gene3D Peptidase S8/S53 domain 154 450 IPR036852 GO:0004252|GO:0006508
Lja2g2016 1023 ProSiteProfiles Serine proteases, subtilase domain profile. 160 451 - -
Lja2g2016 1023 SUPERFAMILY Subtilisin-like 168 456 IPR036852 GO:0004252|GO:0006508
Lja2g2016 1023 Pfam Subtilase family 186 435 IPR000209 GO:0006508|GO:0008236
Lja2g2016 1023 CDD Peptidases_S8_SKI-1_like 178 434 IPR034185 -
Lja2g2016 1023 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 33 851 - -
Lja2g2016 1023 PANTHER PEPTIDASE S8 33 851 - -
Lja2g2016 1023 ProSitePatterns Serine proteases, subtilase family, histidine active site. 224 234 IPR022398 -
Lja2g2016 1023 PRINTS Subtilisin serine protease family (S8) signature 184 203 IPR015500 -
Lja2g2016 1023 PRINTS Subtilisin serine protease family (S8) signature 387 403 IPR015500 -
Lja2g2016 1023 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2016 Lja-Chr2 21443145 21451592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2016 258 1019 Subtilisin-like Serine Gene Family AT5G19660 78.385 0.0 1233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2016 K08653 - gmx:100819188 1766.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2016 2 21443145 21451592 Lja2g2016 2 21443145 21451592 ECH