Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2010 ATGCATCTACTCACTGTAACATGTTCTTGTCCAGATACATGGGGTGCTATAACCGGTATTAGTGAGTTAGATTCGGTCCGCTGGCCAAACTCACACTGCCGTTCTGTGAAGGTTGGCTTGGATGAGTCCACTGCAAGGGAGAGGCAGCCGAGAGTTTCCTTGTGGGAGATTGAACCTTTGACAACATTACCAATGTATCCATCTCCATTCTCCTTGAGGTTGAGGCGCCCTTGGCCTTCTGGACCTTCTTTATATGGTATATGGTGGTTTTGTTAA 276 0.471 MHLLTVTCSCPDTWGAITGISELDSVRWPNSHCRSVKVGLDESTARERQPRVSLWEIEPLTTLPMYPSPFSLRLRRPWPSGPSLYGIWWFC* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2010 91 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 85 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lja2g2010 91 PANTHER AUXIN RESPONSE FACTOR 6 9 85 - -
Lja2g2010 91 Gene3D - 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g2010 Lja-Chr2 21397944 21398374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2010 1 83 B3 DNA Binding Superfamily AT5G37020 72.289 3.65e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2010 - - gmx:100810798 133.265