Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g2004 ATGTATAAACCATTTGTAACATGTGATGATCCAAAAGGAGTTGTTGAGTGTGGAAGCATAAGGAAATACAGGAGTAGTTCTCATAGTTCTCACAAAATGAAGGACAAGACTAAAAGCCGGAGGACGGTCGAAAACTTAGAGACAACATCATTGTCAAACAAAGCAGGCAGAGAAGGGAAGGTCTCAAAAGGATCCGCAGAAAGATCTTTTGATCCATCATCCTTGCAGCTGGTGGAGGTATCAAGAGGGGCTCAAAGGTTGGAAAACATGATTGAATCATGGTCTGGGAGTCTGAGATATGAGGGAAACTCTGAAGATATGGCGAAAGATTTGTTGAAAGGGGCTCTTGACCTGCAAGAATCGCTAGCAATGCTTCGGAAGGTGCAAGAGGCTTCGCAAATGGCGCGCTTGAAGAGAAAGCAAAATGAGAAATATGAAAGAAGTAGAGTTGATTCAAAGGTGATTGATAGAGCAACACATTCTAATCAATTTGGTGAACAAAGTTATACAATGGGAGGATGTCAAAGGCCTTCTTGGTCTTCAGCTGATGCTTCTTCAAGTAATTGCACAGAGGATCTTAAGAAAGTTATTAGGGAGAGTCTGGTTAAGCAAAATCTAGTGCCAAACAAAACCACTGGAGGGTTCGATTCAGCATCAGCATCAGCATTCCCTTCTACGAACTCAAGCCAATCTTCTGGAGTTTGGTATGACAGGCTTTCTGATTCTTCTCCGTCGCCAACAACTACAACTAAGGAAAGAGGATCCAATCTGGTTGCGAAGCTGATGGGTTTAGAAGAAGTTCCTTCAAGACCATTCCAAGCTGGGAAGAAACAGTTGGAGAGTCAAAAGATACTAAATCAAAAGAGACCTATATTTGAGATAGATACACCCAAGGTGAGAAAGAATAGTCCAATATTCGAGACGTTTAATCCCGAACCACAGATGACACTGAGGGAAGTTCTTGAGACTACTAATTTCAATGGACTTTTGAAGAATAGTCCTGTCAGAGAACACAAGCTCCATGTCCATAATTCCAGTTATCCCTGTTACAACCAGTTTGATGATTTACCACCCATTGTACTCATGAAACCTCGATATCGGGAATTTGCAAAAACTTATGAGGCAGTTCCTTCAGAAGAGTTGCCCCTTAGAAATCTAAAAGCAAATGCAGTCCCTTTCCCTTCCAGAACTTTCAAACACAGAGAAGTTTCAACCACCAAGATGGAAAAGGAAATGGAAGAACGTGTATTCAAAAGGCTTACCAAAGAGGAAAGACCTAACCGCCCCAAAGAGGTTGTGGAAGTGGATGTGAAAGAAATCAAACCTGTTGAAAATGAGAAGGGCCCAGGAGGAGGTAAGGTAAAACTGAATAGTCATGCTGGTCACAAATCACAGGCAAGTGAAACAGTTGATAGGAAAGCTAGTGTGAAGACCATTACTGTTATCAGAAAGCTACCAGAAAAGGAGGTTTCAAAGCCTAAAATTGTGGTAAAAGCTCAAGAACAAGGAGTAATCAGCTCAACAGGTGCAAAATTGAGAAAGCCACAAAGTGGGTCCAGAATTGACAAGAATGAGATTCCCAGCAGAAAGAGCACTGCATCAAATTTAAATACCATCTCAAAACCAAAGAATAAAAAAGTTTATAATTCCAAGGAACAGAGAAAAAGTCAGATGAAGAAGCAAAGGTCTATTGCTGAGCCTGAGGCAGCTAAACCAATTGATGTTGTACAATTAGGACAAGAAGAAGGGAAGAGCATTGATGTTTCTTGTGAAGATGATTACACTGATATTAGGGTAATCACTACAATAACAGATGATGTCGCCAAGGAGCGTGAAATAGATGACAATGCAAATAAGATTATAGAAAATTGTGAGCAGAGCCAGAGTTCTTCAGCTGATGATTTTTTTATGCTGAAGTGCGAACATGAAAATGATGCTAACCCTGCTGAGGAAGCTCATGGCACCGCCCATATCAATGAAACTGATCGCAAGCCCGAAGAAGACTTTTCTGAGCTGAAATATTTGCTTCTAACTAGTCAATCATTTATTAGCCATGCAGAGGAGCTCCTCTATCTTGATGCTGATTGTCCTAAGATCCTGCCAAAAAATGATACCAATGCAACAGCCAATTCGAGACTCTATTTGGATTGTGCAAACGAACTCACTGAGCGCAAGAGCCTTCAAGAGTCACAAGTAGCTCACCCTCTATTGCTAACTTGTGCAGGGAATAATTCAAGATTACACATCTCTTTAGGCAGGTTAGTTGAGGAAATCCATAATGCTATTGAGAATCTGACATCTTATTGTGAAAATCCGGGGAAGAAACTTCTTTTGGACTGTGTGTATACAATGATGGAGAGAGATATGACGTGCGGCAATGGAGTCATAAATGGAATATGGAGCTGGGGTTGGAGGCATGGATTTTCTGCAGATGAAGCTGAGCAAGTTGTCAGTGAAGTAGGAAACTTAGTTTTAAGTGGATTAATTGAGGAGGTAATTGCAAATTTATGA 2511 0.4086 MYKPFVTCDDPKGVVECGSIRKYRSSSHSSHKMKDKTKSRRTVENLETTSLSNKAGREGKVSKGSAERSFDPSSLQLVEVSRGAQRLENMIESWSGSLRYEGNSEDMAKDLLKGALDLQESLAMLRKVQEASQMARLKRKQNEKYERSRVDSKVIDRATHSNQFGEQSYTMGGCQRPSWSSADASSSNCTEDLKKVIRESLVKQNLVPNKTTGGFDSASASAFPSTNSSQSSGVWYDRLSDSSPSPTTTTKERGSNLVAKLMGLEEVPSRPFQAGKKQLESQKILNQKRPIFEIDTPKVRKNSPIFETFNPEPQMTLREVLETTNFNGLLKNSPVREHKLHVHNSSYPCYNQFDDLPPIVLMKPRYREFAKTYEAVPSEELPLRNLKANAVPFPSRTFKHREVSTTKMEKEMEERVFKRLTKEERPNRPKEVVEVDVKEIKPVENEKGPGGGKVKLNSHAGHKSQASETVDRKASVKTITVIRKLPEKEVSKPKIVVKAQEQGVISSTGAKLRKPQSGSRIDKNEIPSRKSTASNLNTISKPKNKKVYNSKEQRKSQMKKQRSIAEPEAAKPIDVVQLGQEEGKSIDVSCEDDYTDIRVITTITDDVAKEREIDDNANKIIENCEQSQSSSADDFFMLKCEHENDANPAEEAHGTAHINETDRKPEEDFSELKYLLLTSQSFISHAEELLYLDADCPKILPKNDTNATANSRLYLDCANELTERKSLQESQVAHPLLLTCAGNNSRLHISLGRLVEEIHNAIENLTSYCENPGKKLLLDCVYTMMERDMTCGNGVINGIWSWGWRHGFSADEAEQVVSEVGNLVLSGLIEEVIANL* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g2004 836 MobiDBLite consensus disorder prediction 207 255 - -
Lja2g2004 836 MobiDBLite consensus disorder prediction 505 567 - -
Lja2g2004 836 PANTHER OS01G0228800 PROTEIN 1 834 - -
Lja2g2004 836 MobiDBLite consensus disorder prediction 528 544 - -
Lja2g2004 836 Coils Coil 128 148 - -
Lja2g2004 836 MobiDBLite consensus disorder prediction 545 567 - -
Lja2g2004 836 MobiDBLite consensus disorder prediction 166 185 - -
Lja2g2004 836 MobiDBLite consensus disorder prediction 443 471 - -
Lja2g2004 836 MobiDBLite consensus disorder prediction 23 72 - -
Lja2g2004 836 PANTHER OS01G0228800 PROTEIN-RELATED 1 834 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g2004 665 834 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 31.638 2.80e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g2004 - - lja:Lj2g3v0798860.1 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2004 2 21339086 21343365 Lja2g2004 2 21339086 21343365 ECH