Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1985 ATGGCTTCTTCTTCAATTCGTCCCTCCTATTCTTCATTCACGTTACCCTCTCTCCATTCCTGCAACACTTCTCAAAAGCTCTCTTTTTTTCATCTGGGTAGCGGTATTAGACATTCCCATAATTTTGGCCTGAAATCATCGAGGTCGTCGTTGAGAAATGATGGTCGCGGCATGAGGGTGATGGCGGCATCTGGGAACCTTTCCCTGGCTGCTACACAGGAAAATGCTCTAGAATGGGCCAAACTGGACAGGAGAAAAATGCTTCATGTTGTATATCGTGTTGGGGACTTGGACAAGAGCATAAAATTTTATAGAGAGTGCCTGGGAATGAAGGTGCTCAGAAGACAAGACAATCCAGATGATAGATATACTAATGTATTTCTTGGATATGGGCATGAGCATTCACACTTTTCTATTGAACTTACATATAGTAAGAATTATGGGATTGACAGCTATGACATTGGAACTGGATTCGGCCATTTTGGTCTTGCACTTGATGATATTAAGAGAATAGTCAATATTGCAAGATTAAGGGGTGGCAAAGTAATTAGAGAACCTGGTCCTGACGAAGGAGGAAGCTCCAATATTGCATTTATTGAAGATCCTGATGGTTATCAATTTCAACTTTTGGAAAGGTCTCCCTCTCGTGAGCCCTTGTGCCAAGTAATGCTTCGGGTTGGTGATCTTGATCGGTCTATAAAATTTTATGAGAAGGCTTTTGGTATGGACCTACATCGTAAGCGAGATTATCCAGAATCAAAGTGTACCATTGCAGTGCTGGGTTATGGTCCTGAAGAAAAATCTCCTGTTCTGGCATTGACTTACAACTATGGAGTCACAAAATATGATTTAGGAGATGCTTATGCGCAGTTAACAATAGGCACAGATAATGTGTACAAAACTGCAGAAGCAATTAAACTTGCTGGAGGCACGATTACCCGGGAACCTGGACCGATACCTGGTAGGGACACGCATATTACAGTTTGCGAGGATCCCGATGGTTGGAAGACGGTGTTTGTAGATAATGTTGATTTTCTTAAGGAGTTGGATAGGTGA 1056 0.4214 MASSSIRPSYSSFTLPSLHSCNTSQKLSFFHLGSGIRHSHNFGLKSSRSSLRNDGRGMRVMAASGNLSLAATQENALEWAKLDRRKMLHVVYRVGDLDKSIKFYRECLGMKVLRRQDNPDDRYTNVFLGYGHEHSHFSIELTYSKNYGIDSYDIGTGFGHFGLALDDIKRIVNIARLRGGKVIREPGPDEGGSSNIAFIEDPDGYQFQLLERSPSREPLCQVMLRVGDLDRSIKFYEKAFGMDLHRKRDYPESKCTIAVLGYGPEEKSPVLALTYNYGVTKYDLGDAYAQLTIGTDNVYKTAEAIKLAGGTITREPGPIPGRDTHITVCEDPDGWKTVFVDNVDFLKELDR* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1985 351 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 86 212 IPR037523 -
Lja2g1985 351 TIGRFAM glyox_I: lactoylglutathione lyase 219 343 IPR004361 GO:0004462|GO:0046872
Lja2g1985 351 TIGRFAM glyox_I: lactoylglutathione lyase 73 221 IPR004361 GO:0004462|GO:0046872
Lja2g1985 351 Gene3D - 58 214 IPR029068 -
Lja2g1985 351 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 86 215 IPR029068 -
Lja2g1985 351 ProSitePatterns Glyoxalase I signature 1. 221 242 IPR018146 GO:0004462|GO:0046872
Lja2g1985 351 PANTHER LACTOYLGLUTATHIONE LYASE 10 350 - -
Lja2g1985 351 ProSitePatterns Glyoxalase I signature 2. 155 167 IPR018146 GO:0004462|GO:0046872
Lja2g1985 351 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 10 350 - -
Lja2g1985 351 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 219 342 IPR029068 -
Lja2g1985 351 Gene3D - 215 350 IPR029068 -
Lja2g1985 351 ProSitePatterns Glyoxalase I signature 1. 89 110 IPR018146 GO:0004462|GO:0046872
Lja2g1985 351 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 218 342 IPR037523 -
Lja2g1985 351 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 87 209 IPR004360 -
Lja2g1985 351 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 221 336 IPR004360 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1985 Lja-Chr2 20972899 20976352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1985 221 339 Calmodulin-binding Proteins AT1G08110 24.828 1.95e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1985 K01759 - gmx:100781439 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1985 2 20972899 20976352 Lja2g1985 2 20972899 20976352 ECH
Lja4g0210 4 1645426 1649620 Lja2g1985 2 20972899 20976352 PCT