Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1952 ATGATATTGCTGGTCGCGCTCGCATTGCTTCTTGGTGGCTTCCTTGCTGTTCTTCTTTTCAAACCAAAATCTGGGAATAAGGGGAAAACTCAGACCACCTTTAACAATACTAAGGCATCAAAATCCTACAGTAAAACTGATGTTTCACTGCATAACAAAAGGACAGATTGCTGGATAATCATCAAGAACAAGGTATATGATGTTACCTCATATGTAGAGGAACATCCAGGTGGTGATGCCATTCTAGCACATGCTGGAGATGATTCAACTGAAGGATTTTTTGGGCCACAGCATGCAACTCGAGTCTTTGACATGATTGATGACTTCTACATTGGGGACTTGGAGCAATAG 351 0.416 MILLVALALLLGGFLAVLLFKPKSGNKGKTQTTFNNTKASKSYSKTDVSLHNKRTDCWIIIKNKVYDVTSYVEEHPGGDAILAHAGDDSTEGFFGPQHATRVFDMIDDFYIGDLEQ* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1952 116 Gene3D - 33 116 IPR036400 -
Lja2g1952 116 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 40 115 IPR001199 -
Lja2g1952 116 PANTHER CYTOCHROME B5 5 115 - -
Lja2g1952 116 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 71 78 IPR018506 GO:0020037
Lja2g1952 116 SMART Cyt_b5_2 43 115 IPR001199 -
Lja2g1952 116 PRINTS Cytochrome B5 signature 65 75 IPR001199 -
Lja2g1952 116 PRINTS Cytochrome B5 signature 75 89 IPR001199 -
Lja2g1952 116 PRINTS Cytochrome B5 signature 102 114 IPR001199 -
Lja2g1952 116 Pfam Cytochrome b5-like Heme/Steroid binding domain 45 114 IPR001199 -
Lja2g1952 116 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 38 115 IPR036400 -
Lja2g1952 116 PANTHER CYTOCHROME B5-LIKE PROTEIN 5 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1952 Lja-Chr2 20520611 20524513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1952 4 114 NADPH P450 reductases AT1G60660 61.157 6.62e-49 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1952 - - gsj:114389651 191.43