Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1947 ATGAAACTATTAATAATGTTTCACTTTTTACTCATTTTCTTCCTCATACTGAACCATGCACTTGCAAATTCTCAGTTTAACCTCCATGATGAAGAACATGCAATCCTACTGAAGATAAAACAACACCTTGATAATCCACCATTGCTCAGTCATTGGACCCCATCAAACACATCTCATTGCTCTTGGCCTGAGATCACTTGCACCAATGGTTCTGTCACTGGAATTTTTCTAGTTGACACCAACATCACTCAAACCATACCACCTTTCCTATGTGACCTCAAAAACCTCACACATGTTGATTTCAACAACAACTACATTGGTGGAGGGTTCCCAACATATATCTACAATTGTTCCAAGTTGGAGTACATTGACCTGTCAATGAACAACTTTAATGGAACCATTCCTAATGACATTAACCGCTTGTCGAATTTGCAGTATCTTAACCTCAGTTACACCAATTTCACCGGCGATATACCTGCGAGTGTTGGAATGTTGAAGGAACTGAGATATCTTGCTCTTCAAAATTGTCTGTTTAATGAAACCTTCCCTGATGAGATTGGAAACTTGTCCAATCTTGAAACCTTGGACTTGTCTTTGAACTTGTTCCTTCCTTCAAGATTGCCCACAAGCTGGACCCGGTTGAGGAAATTGAAGATCTTTTACATGTTTGTCTGCCAGCTGGTTGGGGAAATTCCTGAAAGAATTGGAGAGATGGTGGCTTTGGAGAAATTGGATATATCACAAAACAGTTTGAGTGGGCCAATTCCCAGTGGATTGTTCATGCTGAAGAATCTGAGTATAATGTTTCTTTACAGGAATAGTTTTTCTGGGGAGTTACCTGCAGTGGTGGAGGCATTAAACTTGACCATCATTGATCTTACAAATAACAATCTTTCAGGGAAAATACCAGATGATTATGGGAATCTTCAAAAGTTGACTGGCTTGTCTTTATCTATAAATAACCTGTCAGGGGAGATACCACACAGCATAGGCCGCCTTCGTCTGATCGATTTTCGTGTCTTCATGAACAACTTGTCAGGTACTATTCCTCCTGATCTCGGTCGCTATTCAAAGCTTCGATCTTTTCATGTTGCAATAAACAATTTAAGGGGAAAGCTACCAGAGAATTTGTGCTATCATGGGGGGCTACGTAACTTAACTTGTTATGAAAACCATATGACTGGGGAGTTGCCAGAATCACTTGGAAATTGTAGTACCCTTCTGGATTTAAAAATTTACAGCAATGAGTTTTCTGGCACCATTCCTAGTGGTCTTTGGACTTATAATTTGATTAATTTCATGGTAAGCAACAACAAGTTCACTGGTGAGCTCCCTGAAAGATTGACTTCAAGTATTTCACGCGTTGAGATAAGCAACAATCAGTTTTATGGTAGAATTCCAAGGGGAGTATCTTCCTGGGAGAATGTGGTAGAGTTTGAAGCCAGTAATAACAACCTTAGTGGAAGTATTCCTCAAGAGCTAACAGCTCTTCCCAAGTTAACAAAGCTGTTTCTTGATCAGAACCAGCTCACAGGGCCACTTCCATCAGATATAATATCTTGGAAGTCCCTATCAGCTCTAAATTTGAGCCAAAACCAACTCTCTGGACAAATACCGGACGCAATTGGTCGGCTACCGGTCCTTAATCTGCTTGACCTTTCAGAAAATCAATTATCTGGCCAAATTCCTTCCGAACTTCGCAGACTCACAGATCTCGATCTATCCTCCAATCATCTGACAGGGAGGATTCCAACTGATTTTCAAAATTCTGCGTATGCTAGCAGCTTTTTGAACAATTCTGGCCTCTGTGCTGATACCCCAGTCATGAACCTTACCTTGTGCAATTCTGGTCCTCCAAGTTCAAGCAAGGACTCATCTACGCCTATTGCTTTGATAATAAGCCTGGTTGCAGTGGCTATCTTAATGGCTTTGCTGGCATCATTCTTGATTGTCAGATTTTGCAGAAAGAAAAAGAAAGGAAAGGACAACTCATGGAAGCTTATTTCCTTTCAAAGGCTGAGTTTCACTGAATCAGACATAGTGTCCTCATTGACTGAGCAAAATATTATTGGCCGTGGTGGATACGGTACGGTGCACCGCGTTGCTATTGATGGTTTAGGCTATGATGTTGCTGTGAAAAAGATTTGGGAAAACAAGAAGCTAGACCAGAATCTTGAGAGCTCATTCCACACTGAAGTTAAAATATTGAGCAACATTCGGCATAAAAACATTGTGAAGTTGTTGTGCTGTATCTCTAATGAGAATACATTGCTTCTTGTCTATGAGTTTGTCGAAAACCGTAGCCTTGACCGGTGGCTGCACAACAAGAGCAAGCCATCAGCTGTATCAGGTTCAGTCCATCATGTTGTCCTTGATTGGCCAAAGAGATTGCAAATAGCCACTGGGGTTGCCCATGGTTTGAGCTACATGCACCATGAATGCTCAACACCTGTTGTTCATAGAGATGTGAAAACAAGTAACATCCTTTTGGATGCTAGATTCAATGCAAAAGTTGCTGATTTTGGCCTAGCTAGGATGCTAATGAAGCCAGGGGAACTTGCCACCATGTCATCTGTGATTGGATCGTTTGGCTATATGGCTCCAGAATATGTTCAAACAACTAGAGTCAGTGAAAAAGTTGATGTCTTTAGCTTTGGGGTTGTCTTATTGGAATTGACAACCGGTAAAGAAGCTAACTATGGAGATGAGCACTCATCTCTTGCAGATTGGGCTACGCGGCACCTCCGGCTAGGAAGCAGTATTGAAGAACTGCTAGATAAAGGTATCATGGAATCCAGTTACTTGGATGGAATGTGTAAGGTTTTCAAACTTGGGGTCATGTGTACTGCAACAGTTCCTGATAGTAGACCTTCCATGAAGGAGGTGCTGCATGTATTGCTCCATTGTGGCGAACCTTTTGCTTTTGGAGAGATGAATATGGGTCATTATGATGCTGCTCCTCTTCTTAGAAATTCAAAAAGAGAGCACAAGTTGGATATTGATAATGATAGCTAG 3015 0.4123 MKLLIMFHFLLIFFLILNHALANSQFNLHDEEHAILLKIKQHLDNPPLLSHWTPSNTSHCSWPEITCTNGSVTGIFLVDTNITQTIPPFLCDLKNLTHVDFNNNYIGGGFPTYIYNCSKLEYIDLSMNNFNGTIPNDINRLSNLQYLNLSYTNFTGDIPASVGMLKELRYLALQNCLFNETFPDEIGNLSNLETLDLSLNLFLPSRLPTSWTRLRKLKIFYMFVCQLVGEIPERIGEMVALEKLDISQNSLSGPIPSGLFMLKNLSIMFLYRNSFSGELPAVVEALNLTIIDLTNNNLSGKIPDDYGNLQKLTGLSLSINNLSGEIPHSIGRLRLIDFRVFMNNLSGTIPPDLGRYSKLRSFHVAINNLRGKLPENLCYHGGLRNLTCYENHMTGELPESLGNCSTLLDLKIYSNEFSGTIPSGLWTYNLINFMVSNNKFTGELPERLTSSISRVEISNNQFYGRIPRGVSSWENVVEFEASNNNLSGSIPQELTALPKLTKLFLDQNQLTGPLPSDIISWKSLSALNLSQNQLSGQIPDAIGRLPVLNLLDLSENQLSGQIPSELRRLTDLDLSSNHLTGRIPTDFQNSAYASSFLNNSGLCADTPVMNLTLCNSGPPSSSKDSSTPIALIISLVAVAILMALLASFLIVRFCRKKKKGKDNSWKLISFQRLSFTESDIVSSLTEQNIIGRGGYGTVHRVAIDGLGYDVAVKKIWENKKLDQNLESSFHTEVKILSNIRHKNIVKLLCCISNENTLLLVYEFVENRSLDRWLHNKSKPSAVSGSVHHVVLDWPKRLQIATGVAHGLSYMHHECSTPVVHRDVKTSNILLDARFNAKVADFGLARMLMKPGELATMSSVIGSFGYMAPEYVQTTRVSEKVDVFSFGVVLLELTTGKEANYGDEHSSLADWATRHLRLGSSIEELLDKGIMESSYLDGMCKVFKLGVMCTATVPDSRPSMKEVLHVLLHCGEPFAFGEMNMGHYDAAPLLRNSKREHKLDIDNDS* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1947 1004 PRINTS Leucine-rich repeat signature 548 561 - -
Lja2g1947 1004 PRINTS Leucine-rich repeat signature 566 579 - -
Lja2g1947 1004 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 8 997 - -
Lja2g1947 1004 SUPERFAMILY Protein kinase-like (PK-like) 677 970 IPR011009 -
Lja2g1947 1004 ProSiteProfiles Protein kinase domain profile. 684 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1947 1004 Gene3D Ribonuclease Inhibitor 204 336 IPR032675 -
Lja2g1947 1004 Gene3D Ribonuclease Inhibitor 337 614 IPR032675 -
Lja2g1947 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Lja2g1947 1004 SUPERFAMILY L domain-like 32 284 - -
Lja2g1947 1004 SMART LRR_typ_2 141 165 IPR003591 -
Lja2g1947 1004 SMART LRR_typ_2 189 214 IPR003591 -
Lja2g1947 1004 SMART LRR_typ_2 309 333 IPR003591 -
Lja2g1947 1004 SMART LRR_typ_2 497 521 IPR003591 -
Lja2g1947 1004 SMART LRR_typ_2 238 262 IPR003591 -
Lja2g1947 1004 SMART LRR_typ_2 566 589 IPR003591 -
Lja2g1947 1004 SMART serkin_6 684 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1947 1004 Pfam Leucine Rich Repeat 568 589 IPR001611 GO:0005515
Lja2g1947 1004 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 997 - -
Lja2g1947 1004 Pfam Leucine rich repeat 95 153 IPR001611 GO:0005515
Lja2g1947 1004 SUPERFAMILY RNI-like 287 589 - -
Lja2g1947 1004 Gene3D Phosphorylase Kinase; domain 1 666 763 - -
Lja2g1947 1004 Gene3D Ribonuclease Inhibitor 29 203 IPR032675 -
Lja2g1947 1004 ProSitePatterns Protein kinases ATP-binding region signature. 690 714 IPR017441 GO:0005524
Lja2g1947 1004 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Lja2g1947 1004 Pfam Protein kinase domain 686 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1947 1004 Gene3D Transferase(Phosphotransferase) domain 1 764 973 - -
Lja2g1947 1004 CDD STKc_IRAK 690 966 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1947 Lja-Chr2 20452302 20456099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1947 24 1000 Receptor kinase-like Gene Family AT5G25930 50.202 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja2g1947 Pkinase 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1947 - - gmx:100798963 1477.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1947 2 20452302 20456099 Lja2g1947 2 20452302 20456099 ECH