Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1938 ATGGAGACGTTTAAGAAACCTCTCTTTGTGATCACTCTCTCTGTTTTGTTTCTTGTACTCTGCAACATGTCTCTAGCGAGAAATGTAAAGACCACAGAGGATCAAAAGAGTAGTTACATAGTACATGCTGCCAAATCCCAAATGCCAGCAAGCTTTGACCACCATTCAACATGGTTCAAATCAACTTTGAAGTCGGTATCTGACTCAGCAGAAATGATCTACACCTATGACAAAGTTATCCATGGATTCTCAACAAGGTTAACACCTGAGGAAGCCCGTTTGCTGCAGAGCAGAAACGAGATTCTAAAGGTGCTACCAGATAGAATCCTCAAGCTCCAAACAACCCGAACCCCACAGTTTCTCGGGCTCGATAAAATTCCTACAAGCACATTTGCCCAATCCAACACAGGAGGTAGTGACATCGTCATCGGAGTCATAGACACTGGTATTTGGCCGGAGAGCAAGAGCTTCGACGACACCGGGTACGGACCCATTCCCAGTACTTGGAAAGGCAAATGTGAGTCAGATGCAAATTTCACAGCAGCCAACTGCAACAAGAAACTGATCGGAGCCCTGGCCTATAAAAGTGGTTTCCTGGCCTCTATGGGTCGAATCGGTGACTCCGTAGTTTCTATGTCCCCACGTGATGATGAAGGTCACGGCACCCACACTGCTAGTACTGCTGCAGGCTCTCCCGTGCAAAACGCGAGTCTCTTCGGTTACGGTGCCGGAACGACGCGTGGGATGGCCCCACGCGCTAGAATCGCTGTGTACAAGGTTTGCTGGGCGGAGGATGGTTGTGTTGAATCTGACATACTAGCGGCGATGGATCGAGCCATCGCAGACAATGTGAATATCCTTTCCTTGTCACTCGGGGGTGGACAACCCGAGTACTACAGGGACAACGTCGCGATTGGAGCGTTTTCAGCAATGGAGCATGGAATTGTTGTGTCTTGCGCCGCGGGAAACAACGGCCCTGATCCCTATTCTCTCAGCAATCTGGCACCTTGGATTATCACTGTGGGAGCTGGCACAATCGATCGAGATTTCCCTGCATATGTTAGCCTTGGAAATGGGAAAAACTATTCTGGTGTGTCCCTTTACAGTGGCAACAAATTGCCTAATAAACCTGTTTTGCCACTCATCTATGGGGAGAGTGCGGGATTTGGAGGAGCGAATTGTCAGCCAGGAAGCTTGTACTTGCCGCAAAAAGTCAAGGGAAAAATCGTGGTGTGTGATCGCGGAATAAACAGTAGGGCGGAGAAAGCAGAGGTGGTAAAATCTGCCGGCGGTTTGGGCATGGTGTTGGCCAACCGCGTGTCTGATGGGGAGGATATGACAGCAGATTCATTTGTTTTACCGGGACTTTTGGTGGGCGCAAAGGCTGGTGAAGCTATCAAGCAGTACCTACGTTCTGATCCAAAAGCGACAGCCACAATTGTGTTTGGGGGAACAAAGGTCGGGATCGAGCCATCCCCCGTTGTTGCGGCGTTCAGTTCTAGGGGCCCAAGTATTCTCCATCCAGAAATATTGAAGCCTGATTTGATCGCGCCTGGTGTCAACATCTTAGCTGCATTCACAAGGAATGCAGGTCCGAGTGGTTTGGATTCTGATCAAAGGCGTGTGGATTTCAGCATCATGTCAGGCACGTCCATGTCATGCCCTCACGTGAGCGGTATCGCAGCTCTAATTAAGTCGGCTCATCCAGACTGGAGCCCAGCCGCCATTCGATCTGCGCTGATGACAACGGCTTATTCGACTTACAAAAATGGTAATCCCTTGCTCGACAGTGCAACTGGAAAACCAGCAACACCATTTGATTTTGGCGCAGGACACGTGGACCCCGTCTCTGCACTTAATCCCGGGCTTATTTATGATTTAACGGTGGATGATTATCTGAATTTTCTTTGTTCAAAGTATACATCTGAAGAGATTCAAATCCTGGCAAGGAGAAAATACTTGTGCCATGGAAAGATAGACAACCTTAATTACCCTTCATTTAGTGTGGTTTTTTCAGATAAAGTTGCGCAGGTTAAGCAAATGCGAACTCTCACCAATGTAGGTGCGGCGGGAACGTACAAAGTATCTGTTAAGATAGATACCCCAGGGTTCAAGGTCACGGTTCAACCGGAAGTATTGAGTTTTGGAGTAAATGAGAAAAAATCTTATACAGTTACATTCATCGCATCAGGTGTCAAGCCGCAGAAAACTCATGGTTTTGGACGTTTAGAATGGTCTAATGGAAAGAATGTTGTTGGAAGTCCTATCGCGTTTAGTTATTAG 2283 0.4779 METFKKPLFVITLSVLFLVLCNMSLARNVKTTEDQKSSYIVHAAKSQMPASFDHHSTWFKSTLKSVSDSAEMIYTYDKVIHGFSTRLTPEEARLLQSRNEILKVLPDRILKLQTTRTPQFLGLDKIPTSTFAQSNTGGSDIVIGVIDTGIWPESKSFDDTGYGPIPSTWKGKCESDANFTAANCNKKLIGALAYKSGFLASMGRIGDSVVSMSPRDDEGHGTHTASTAAGSPVQNASLFGYGAGTTRGMAPRARIAVYKVCWAEDGCVESDILAAMDRAIADNVNILSLSLGGGQPEYYRDNVAIGAFSAMEHGIVVSCAAGNNGPDPYSLSNLAPWIITVGAGTIDRDFPAYVSLGNGKNYSGVSLYSGNKLPNKPVLPLIYGESAGFGGANCQPGSLYLPQKVKGKIVVCDRGINSRAEKAEVVKSAGGLGMVLANRVSDGEDMTADSFVLPGLLVGAKAGEAIKQYLRSDPKATATIVFGGTKVGIEPSPVVAAFSSRGPSILHPEILKPDLIAPGVNILAAFTRNAGPSGLDSDQRRVDFSIMSGTSMSCPHVSGIAALIKSAHPDWSPAAIRSALMTTAYSTYKNGNPLLDSATGKPATPFDFGAGHVDPVSALNPGLIYDLTVDDYLNFLCSKYTSEEIQILARRKYLCHGKIDNLNYPSFSVVFSDKVAQVKQMRTLTNVGAAGTYKVSVKIDTPGFKVTVQPEVLSFGVNEKKSYTVTFIASGVKPQKTHGFGRLEWSNGKNVVGSPIAFSY* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1938 760 Gene3D - 636 760 - -
Lja2g1938 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 759 IPR045051 -
Lja2g1938 760 CDD Peptidases_S8_3 110 585 IPR034197 -
Lja2g1938 760 SUPERFAMILY Subtilisin-like 112 623 IPR036852 GO:0004252|GO:0006508
Lja2g1938 760 Pfam Subtilase family 138 611 IPR000209 GO:0006508|GO:0008236
Lja2g1938 760 Pfam Fibronectin type-III domain 661 757 IPR041469 -
Lja2g1938 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Lja2g1938 760 Pfam Peptidase inhibitor I9 38 112 IPR010259 -
Lja2g1938 760 Gene3D - 347 488 - -
Lja2g1938 760 ProSiteProfiles Serine proteases, subtilase domain profile. 120 619 - -
Lja2g1938 760 CDD PA_subtilisin_like 353 480 - -
Lja2g1938 760 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Lja2g1938 760 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Lja2g1938 760 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Lja2g1938 760 Gene3D Peptidase S8/S53 domain 140 632 IPR036852 GO:0004252|GO:0006508
Lja2g1938 760 Pfam PA domain 390 466 IPR003137 -
Lja2g1938 760 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 27 759 - -
Lja2g1938 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 113 IPR037045 -
Lja2g1938 760 SUPERFAMILY PA domain 400 473 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1938 Lja-Chr2 20314455 20316737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1938 11 760 Subtilisin-like Serine Gene Family AT5G67360 60.818 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1938 - - gmx:100801866 983.015