Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1935 ATGGGGAACAAAATCGCGCGCACGACGCAGGTATCGGCGTCGGAGTACTACCTGCACGAGCTGCCGTCGACGTACAATCTGGTCCTGAAGGAGGTTCTAGGTCGCGGCCGTTTCTTCAAGTCGATTCAGTGCAAGCACGACGAGGGTTTGGTCCTCGTCAAGGTTTATTTCAAGCGCGGCGATTCGCTTGATCTCTTTGACCATGAGCGCCGTCTCTCTCAGATCAAGGAGATTTTCACCGCCATTGATCATCCTCACGTTTGGCCCTTTCAGTTTTGGCAAGAGACGGATAAAGCAGCGTACCTTTTGAGACAGTATTTCTTTCATAATCTGCATGATCGATTAAGCACTAGGCCTTTTCTTAGTTTCGTTGAGAAGAGATGGTTGGCTTTTCAGTTGGTTTTAGCTGTGAAACAGTGCCACGAGAAGGGAGTGTGTCATGGTGATATCAAGTGTGAGAATGTACTGATTACATCCTCGAATTGGCTTTACCTTGCCGACTTTGCATCTTTCAAACCCACTTACATTCCATATGATGACCCATCTGATTTCTCTTTTTTCTTTGACACTGGGGGAAGAAGACTCTGTTATCTAGCGCCTGAGAGATTTTATGAACATGGAGGGGAGATGCAGGTGGCACAAGATGCCCCCTTAAAGCCATCAATGGATATATTTGCTGTCGGGTGTGTAATTGCTGAACTTTTCCTTGAGGGGCAGCCACTATTTGAACTGTCTCAACTTCTTGCTTATCGCAGAGGGCAATATGATCCAAGTCAACATCTTGAAAAAATACCAGATATTGGAATCCGTAAGATGATTCAGCACATGATTCAGTTAGAACCAGAGTCTCGATTTTCTGCGGAAAGATACTTAAAGGAATATGCTGCAGTTGTATTCCCAACCTATTTTTCGCCATTTTTGCATGATTTTTACCGTTGCTGGAGTCCTCTTCATTCTGATATGAGGGTTTTGCTATGCCAGAGTGCTTTCCAGGAGATACTGAAACAAATGATGAACACGCATTCATCTAATGATGCAGGTGTTACTTCTGGGGAACTTTTGGAAGAGATGTTTGCTAAAGAAAGTGTAAGTTTCATGAAGGACTCACTGATGAAAAGAGAGGACATAGGCAAAGGCTTAGTTCATGACAATTATGAACTTCTTGGTGATATTAATAGCCTCCTGAGGGATGCTAAAATAAATAAGTATCCATCTGGTCCCAGACATGTAACAGGAAATGCACACAATTCTACCTTTCCTGAAAATCTAAAAAGTTTGCAGTCGCCTGGTGAATTGCTTCAAACTATCTCCAATGCATTTCGAGGAAATGATCATCCCTTTCTGAAAAGTATTACCATGAATGATTTAAATACATTGATGTCTGAGTATGATAGTCAATCAGATACATTTGGAATGCCTTTTCTGCCAGTACTAAAGGATAGCATGAGATGCGAAGGCATGGTTTTGATAACTTCTTTGCTCTGCTCGTGCATACGCAATGTCAAGTTGCCTCACCTGAGGAGGGCTGCTGTACTCTTGTTGAAGGCTTCCGCCCTATATATTGACGATGAAGATCGTTTGCAGCGTGTTATCCCATATGTGATTGCAATGATTTCTGATCCAGCAGCAATTGTTCGTTGTGCTGCTTTGGAGACTTTGTGTGACATTCTGCCCTTAGTGCGAGATTTTCCTCCCAGTGATGCAAAGATATTTCCCGAGTACATTCTTCCTATGCTCTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGCTATGCCAGCAATATAGCTAAGCTGGCACTAACTGCTTATGGATTCTTGATACACTCAATAAGCTTGAGTGAGGCAGGTGTCCTTGATGAATTGAGTTCACCACAGAAGCCATTGATATCATCTACTCAGACCTCTGGAAGAGTGAAGAGGATACATAGTGATGTCCAACTTTTGCAGCTGAGGAAATCAATTGCAGAGGTTGTCCAAGAACTTGTCATGGGTCCAAAGCAAACACCAAATATTAGGAGAGCACTTCTTCAGGACATTGCTAAACTGTGCTACTTCTTTGGTGTGAGACAGAGTAATGACTCTCTCTTACCTATCCTTCCTGCTTTCTTAAATGATCGGGATGAGCAATTAAGGGCAGTGTTCTATGAAAAAATTGTTTATGTCTGCTTTTTTGTGGGTGAAAGAAGTGTTGAAGAATATCTTTTACCTTACATTGAGCAAGCTTTAAGTGACATGACGGAAGCTGTCATTGTTAGAGCATTAGAATGTTTGGCTATTCTATGCAAAAGTGGGTTCTTCCGGAAGAGGATATTGCTTCAAATGATAGAACGTGCCTTTCCTTTGTTGTGCTATCCTAGTGAATGGGTACGAAGATCAGTGGTCTCTTTCATTGCTGCTAGCAGTGAAAGCTTAGGTGCAGTAGATTCTTATGTTTTTCTTGCTCCTGTTATACGGCCTTTCCTCCGTAGACAACCTGTGTCTCTTGCTTCCGAGAAAGCTCTTTTGTCATGTTTAAAACCTCGGGTTTCAAGACAGGTTTTCTATGAAGTCTTGGAGAATTCCAGGAGTTCAGACATGTTAGAAAGACAGAGGAAGATATGGTATAGTTCATCACAATCTAAGCTTTGGGAAATGGATTTACTGAAAAAAGGAATTGATGAGTTGGACTCGTTAAAGAACTGGAGTGACAAGCAACAGGGTCCTGGGGTTCAACAAGCTGTTGGCACTGCCTTTCAAGAGCCAGGCCTAACTGATTGTGACAAAGCTGAGGCAAAATTGAGAGATATTGGGGCCTTTATGCATAGTGATAGCAATATTGTGGGTCATCGTGATTCCCAGGGCTTGGAAAAGTTACAGTTTTCAGGGTTTATGTCACCAACTTTTAGTGGTGTGAACAGTTTGACATATGAAAAGCCATCAGAAGGCATACCTTTGTACTCCTTCAGTGTAGACAGACGAGGAATGGGAATACCTCCTGCAGCATCTGATTCTCCTCTACAAATGAATTCTCTGGGTGTTAGTTCATCTGCGATGCCTTGGGTTAATCCACTTAGTAAGTCCTTTAGTTTGGCTAATTCAGTTCCAGCTCCGAAGCTATTTTCAGGTTCTTTCAGCATCACCAATGGTTCAAAACAGTTCCACAGAGTGGTACATGAACCAGATTCCAGGGAAAATGAGCCAGCCTATGTTAATAGCACATTTCAAGACGCAGGATCATCTTCTAATAGTAAAGGTACTTCACTTTCACCAGAAGATGCTACTGCCCAAACTGATCTATCAGGATTTTCATCTTTTGCTCGGACATCCATTCCCGATTCTGGTTGGAGGCCACGTGGGGTGTTGGTTGCACACCTCCAGGAGCACCGTTCAGCTGTCAGTGACATAGCGATTTCTTCTGATCAAAGCTTCTTTGTGAGTGCATCTGATGACTCTACAGTTAAGATTTGGGATTCCAGGAAACTGGAAAAAGACATTTCATTCAGGTCAAAGCTAACTTATCACCTGGAGGGAAGCCGTGCATTATGTGCGGCAATGCTTCCAGGTTCTGCACAAGTAATAGTTGGAGCATCTGATGGATTTATTCATATGTTTTCTGTTGATCATATCTCTAGAGGTCTAGGGAATGTTGTTGAGAAGTATTCAGGTATTGCTGACATCACAAAGAAGGATATTAAGGAAGGTGCCATACTCTGCCTTTCAAATTGCCCTCTGGATAATTATACCGTTATGTATAGCACCCAGAACTGTGGTGTTCATCTGTGGGATACTAGGTCAAATTCCAATACCTGGACCCTGAAAGCTACTCCTGAGGAGGGCTATGCTTCTTCTCTGGCATCAGGGCCTTGTGGCAATTGGTTTGTATCAGGATCATCCAGGGGTGTCATTACACTTTGGGATCTGAGGTTTCTTGTACCTGTGAACTCTTGGAAGTGTTCTCTCTCTTGCCCTATCGAAAAGATGTGCCTCTTTCTTCCTCCGAATGCTTCTCTGTCTTCAACTGCTAGGCCCCTTGTTTATGTGGCTGCTGGCTCCAATGAAGTTTCTCTTTGGAATGCAGAGAATGGTAGTTGTCACCAGGTACTGAGGATGGCCAATTATGACAGTGATGCAGAAATGTCTGATCTGCCTTGGGCCTTATCCAGACCTTCAACTAAGACAACTTCTCAATCTGATCCAAGACGAAATGTTAATCGCAAGTATGGAGTTGATGAGTTAAATGAGCCTCTTCCTCGTCTTCCTGGTATCCGTTCTTTACTTCCCTTGCCAGGGGGTGATTTATTGACTGGGGGCACTGATTTAAAGATACGTCGATGGGATCATTACAGTCCTGACAGAAGTTACTGCATTTGTGGACCAAACATAAAAGGAGTAGGAAGTGATGATTTTTACGAAACAAAATCTAGTTTTGGAGTGCAAGTTGTACAGGAGACAAAAAGACGTCCTCTTACAACCAAGGTGACAGCGAAGGCAATCCTTGCTGCTGCTGCTACTGATTCTGCCGGGTGCCATCGTGATTCTATTGTTTCTTTGGCTTCTGTTAAGTTAACCCAGAGACTCTTACTGTCCAGTGGTAGAGATGGAGCCATCAAGGTCTGGAGATAA 4611 0.4311 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDSLDLFDHERRLSQIKEIFTAIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFVEKRWLAFQLVLAVKQCHEKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDIGIRKMIQHMIQLEPESRFSAERYLKEYAAVVFPTYFSPFLHDFYRCWSPLHSDMRVLLCQSAFQEILKQMMNTHSSNDAGVTSGELLEEMFAKESVSFMKDSLMKREDIGKGLVHDNYELLGDINSLLRDAKINKYPSGPRHVTGNAHNSTFPENLKSLQSPGELLQTISNAFRGNDHPFLKSITMNDLNTLMSEYDSQSDTFGMPFLPVLKDSMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIAMISDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGVLDELSSPQKPLISSTQTSGRVKRIHSDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIAKLCYFFGVRQSNDSLLPILPAFLNDRDEQLRAVFYEKIVYVCFFVGERSVEEYLLPYIEQALSDMTEAVIVRALECLAILCKSGFFRKRILLQMIERAFPLLCYPSEWVRRSVVSFIAASSESLGAVDSYVFLAPVIRPFLRRQPVSLASEKALLSCLKPRVSRQVFYEVLENSRSSDMLERQRKIWYSSSQSKLWEMDLLKKGIDELDSLKNWSDKQQGPGVQQAVGTAFQEPGLTDCDKAEAKLRDIGAFMHSDSNIVGHRDSQGLEKLQFSGFMSPTFSGVNSLTYEKPSEGIPLYSFSVDRRGMGIPPAASDSPLQMNSLGVSSSAMPWVNPLSKSFSLANSVPAPKLFSGSFSITNGSKQFHRVVHEPDSRENEPAYVNSTFQDAGSSSNSKGTSLSPEDATAQTDLSGFSSFARTSIPDSGWRPRGVLVAHLQEHRSAVSDIAISSDQSFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHLEGSRALCAAMLPGSAQVIVGASDGFIHMFSVDHISRGLGNVVEKYSGIADITKKDIKEGAILCLSNCPLDNYTVMYSTQNCGVHLWDTRSNSNTWTLKATPEEGYASSLASGPCGNWFVSGSSRGVITLWDLRFLVPVNSWKCSLSCPIEKMCLFLPPNASLSSTARPLVYVAAGSNEVSLWNAENGSCHQVLRMANYDSDAEMSDLPWALSRPSTKTTSQSDPRRNVNRKYGVDELNEPLPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPNIKGVGSDDFYETKSSFGVQVVQETKRRPLTTKVTAKAILAAAATDSAGCHRDSIVSLASVKLTQRLLLSSGRDGAIKVWR* 1537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1935 1536 ProSiteProfiles Trp-Asp (WD) repeats profile. 1121 1153 IPR001680 GO:0005515
Lja2g1935 1536 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1535 IPR045162 GO:0004674|GO:0016236|GO:0045324
Lja2g1935 1536 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1935 1536 Gene3D - 1225 1536 IPR015943 GO:0005515
Lja2g1935 1536 MobiDBLite consensus disorder prediction 1068 1091 - -
Lja2g1935 1536 SUPERFAMILY WD40 repeat-like 1115 1536 IPR036322 GO:0005515
Lja2g1935 1536 ProSiteProfiles HEAT repeat profile. 698 736 IPR021133 -
Lja2g1935 1536 CDD STKc_Vps15 16 303 - -
Lja2g1935 1536 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1935 1536 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1935 1536 SUPERFAMILY Protein kinase-like (PK-like) 25 292 IPR011009 -
Lja2g1935 1536 Gene3D - 1053 1221 IPR015943 GO:0005515
Lja2g1935 1536 ProSiteProfiles Trp-Asp (WD) repeats profile. 1503 1536 IPR001680 GO:0005515
Lja2g1935 1536 Gene3D Transferase(Phosphotransferase) domain 1 21 348 - -
Lja2g1935 1536 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1503 1536 - -
Lja2g1935 1536 Pfam HEAT repeat 530 558 IPR000357 GO:0005515
Lja2g1935 1536 Pfam WD domain, G-beta repeat 1117 1153 IPR001680 GO:0005515
Lja2g1935 1536 SUPERFAMILY ARM repeat 281 826 IPR016024 -
Lja2g1935 1536 SMART WD40_4 1261 1302 IPR001680 GO:0005515
Lja2g1935 1536 SMART WD40_4 1114 1153 IPR001680 GO:0005515
Lja2g1935 1536 SMART WD40_4 1408 1442 IPR001680 GO:0005515
Lja2g1935 1536 SMART WD40_4 1496 1536 IPR001680 GO:0005515
Lja2g1935 1536 SMART WD40_4 1164 1201 IPR001680 GO:0005515
Lja2g1935 1536 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1121 1153 - -
Lja2g1935 1536 Gene3D - 669 842 IPR011989 -
Lja2g1935 1536 Gene3D - 434 618 IPR011989 -
Lja2g1935 1536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1935 Lja-Chr2 20283550 20291437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1935 31 324 AGC Kinase Gene Family AT3G08730 24.540 1.26e-11 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Lja2g1935 Pkinase 1.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1935 K08333 - gmx:100818467 2771.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g1935 2 20283550 20291437 Lja2g1935 2 20283550 20291437 ECH