Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g1912 ATGGCTTTGGCAAGTTCTATTGGATTCATCATGTTACTGATGCTTTGCATTCATCTCTTAGTTTTAGTACATGCCCAGGAACAAAGAGGCTATATAAGCATTGATTGTGGTAATTCAATGAATTTTGAGTACACAGATGATACTACTAAAATAAGGTACAACCCAGATGGGGCATACATACAAACAGGGGTTGACAAAAACATCTCCTCTGAGTATGCATACCCAAACAATCCCATTCTGCCACAACCACTCTCAGATCTCAGAAGTTTCCCTCAGGGATTGAGGAACTGTTACAGGTTAACTGCAGGAAGTAGAGGGAGTTTACATTTAATCAGGGCTTCCTTCTTGTATGGGAACTATGATGGAGAAAACAAGCTCCCAGAATTTGATCTGTATGTTGGTGCCAGATTCTGGTCATCAGTGAAATTCAGAAATGCTTCAGAGGAAGTTACAATGGAAACAATCAGCAAGGCAGAGTCAGAGGTGACAAGTGTTTGTCTGGTGGACAAGGGAACAGGAACTCCATTTATCTCAGGATTGGAACTTAGACCACTTAATAGTTCCATTTATGATACTGACTTTGGGGAATCTGCTTCACTTTTGCTTTATAAAAGATGGGATTTTGGGTCAACCAATGGAAGTGGTAGATATGAAGATGATATTTATGATAGAATTTGGTTCCCTTACAATTCCTCTACCTGGGAATCTGTCAGCACTTCTTCAGAGATAAATGTCAATGGTGATGGCTATAGAGCTCCATTTGAAGTCATCAGAACTGCTGCTAGACCAAGAAATGGCAGTGATACTTTGGAATTTTCATGGACCCCAGATGATCCAAGTTGGGAATTTTATGTCTACTTGTACTTTGCTGAAGTGGAGCATCTTCACAAAAACCAACTTAGAAAATTCAATATATCCTGGAATGGTTCTCCTTTAGTTGAATCCTTTGTACCACAGTACTTGCAAGCAACCACTCTTTCTAATTCAAAACCCTTGGTGGCGAATAAACATAGAATTTCTATACACAAAACAAAAGATTCAACCCTTCCACCCATTCTTAATGCAGTTGAGATTTATGTAGTAAGACAACGGGATGAACTTCCAACATTTGAACAAGATGTTGATGCTGTGGTGTGCATAAAAGAAAGTTATAGAATCCAAAGAAATTGGGTAGGTGATCCTTGTGAGCCAGAGAACTACAATTGGGAGGGCTTAAAATGCAACTATAGCACTTCACTTCCTGCCAGAATCATATCACTGAACCTGAGCTCAAGCAATTTGAATGGAGTGATTACTACTGCCATTTCCAATCTCTCCTCATTGGAATCTTTGGATTTATGCAACAATAGCTTAACTGGACCAGTGCCTCAGTTTCTGGAAGAATTGAGGTCCCTTAAATATTTGAATTTAAAGGGCAACCAACTTTCAGGTTATGTCTCTGACACTCTTCTAGACAGATCAAATGCTGGATTACTTACACTGAGGGTGGATGATAAAAACCTGCATGTCGATAAGAGTGATAAAAAGAAAATTGTTGCTGCCGTAGTCGCACCAATATCATTGGTTTTAGTTCTTTTGGTTATTATCATTCTCTATCGGAAGATTAGAAGAAATGAACAATCAGATAAGGAGATGAATAAGCCCAACAAAGGAGGAACAACTGTAGCATCAAAGAAGTGGCAATACACTTATGCTGAGGTGTTGAACATCACAAGCAACTTTGAAGTGGTTATTGGGAAAGGAGGATTTGGAACTGTGTTCAGTGGTCAGATGAAAGATGGCAACAAAGTTGCAGTCAAGATGCTCTCTCCATCATCAGCTCAAGGGCCAAAGGAATTTCAGACTGAGGCTGAGCTCTTGATGACAGTTCATCACAAAAATTTGGTTTCCTTTGTTGGTTATTGCGATGAAGATAACAAGATGGCACTCATATATGAGTACATGGCCAATGGCAACCTGAAAGAGTGTCTCTCAGATAAAAGTTCACATTGCCTGAGTTGGGAAAGGAGACTCCAGATAGCAATTGATGCCGCAGAGGGATTGGATTACCTGCACCATGGATGCAAGCCACCTATAATACATAGGGATGTGAAGTCAGCCAACATTCTTTTGAGTCAAGACTTAGAAGCTAAGATAGCAGATTTTGGCCTCTCCAAGGTGTTTAGGATTGACAACCAAAATGCAGAATCACCATTGATTAATTCTAATGGTGATAGAAGTCCAAAATCTACACTCATGGGCACAACAGGGTACCTTGACCCAGAGTACTTCAAATTACGGAACTTGAATGAGAAAAGTGATGTATTTAGCTTTGGAATTGTTCTATTGGAATTAATCACTGGTCGACATGCAGTACTAAAAGGTAACCCATGTATGCACATACTTGAGTGGCTAACACCTGAGCTTGAAGGAGGTGATGTGAGCAGAATTTTGGACCCAAGGCTACAAGGAAAATTCGATGCAAGTTCTGGATGGAAAGCTTTAGGAATAGCAATGTCATGCACTGCACCATCCTCCATTCAGAGACCTACCATGAGTGTTGTGTTAGCAGAGCTAAGACAGTGTTTTAGAATGGAGTCGCCTAGTGATAGGGAAATATTTGTGGCCCCAAGACCGGTCTGTAATGAATTTTACAGTTCAACTGAAGCATGTTCCTTAGATAGTGAATCTTTCACCTATCCTTTCCCAAGGTAA 2694 0.4013 MALASSIGFIMLLMLCIHLLVLVHAQEQRGYISIDCGNSMNFEYTDDTTKIRYNPDGAYIQTGVDKNISSEYAYPNNPILPQPLSDLRSFPQGLRNCYRLTAGSRGSLHLIRASFLYGNYDGENKLPEFDLYVGARFWSSVKFRNASEEVTMETISKAESEVTSVCLVDKGTGTPFISGLELRPLNSSIYDTDFGESASLLLYKRWDFGSTNGSGRYEDDIYDRIWFPYNSSTWESVSTSSEINVNGDGYRAPFEVIRTAARPRNGSDTLEFSWTPDDPSWEFYVYLYFAEVEHLHKNQLRKFNISWNGSPLVESFVPQYLQATTLSNSKPLVANKHRISIHKTKDSTLPPILNAVEIYVVRQRDELPTFEQDVDAVVCIKESYRIQRNWVGDPCEPENYNWEGLKCNYSTSLPARIISLNLSSSNLNGVITTAISNLSSLESLDLCNNSLTGPVPQFLEELRSLKYLNLKGNQLSGYVSDTLLDRSNAGLLTLRVDDKNLHVDKSDKKKIVAAVVAPISLVLVLLVIIILYRKIRRNEQSDKEMNKPNKGGTTVASKKWQYTYAEVLNITSNFEVVIGKGGFGTVFSGQMKDGNKVAVKMLSPSSAQGPKEFQTEAELLMTVHHKNLVSFVGYCDEDNKMALIYEYMANGNLKECLSDKSSHCLSWERRLQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSQDLEAKIADFGLSKVFRIDNQNAESPLINSNGDRSPKSTLMGTTGYLDPEYFKLRNLNEKSDVFSFGIVLLELITGRHAVLKGNPCMHILEWLTPELEGGDVSRILDPRLQGKFDASSGWKALGIAMSCTAPSSIQRPTMSVVLAELRQCFRMESPSDREIFVAPRPVCNEFYSSTEACSLDSESFTYPFPR* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g1912 897 Pfam Malectin-like domain 34 360 IPR024788 -
Lja2g1912 897 SMART serkin_6 572 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja2g1912 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Lja2g1912 897 Gene3D Transferase(Phosphotransferase) domain 1 649 867 - -
Lja2g1912 897 SUPERFAMILY Protein kinase-like (PK-like) 557 852 IPR011009 -
Lja2g1912 897 ProSitePatterns Protein kinases ATP-binding region signature. 578 600 IPR017441 GO:0005524
Lja2g1912 897 Gene3D Ribonuclease Inhibitor 374 490 IPR032675 -
Lja2g1912 897 CDD STKc_IRAK 578 852 - -
Lja2g1912 897 Pfam Leucine rich repeat 419 475 IPR001611 GO:0005515
Lja2g1912 897 Gene3D Phosphorylase Kinase; domain 1 578 648 - -
Lja2g1912 897 Pfam Protein tyrosine and serine/threonine kinase 575 848 IPR001245 GO:0004672|GO:0006468
Lja2g1912 897 Gene3D - 206 362 - -
Lja2g1912 897 SUPERFAMILY L domain-like 398 494 - -
Lja2g1912 897 PANTHER BNAC07G41790D PROTEIN 10 859 - -
Lja2g1912 897 PANTHER OS07G0107800 PROTEIN-RELATED 10 859 - -
Lja2g1912 897 ProSiteProfiles Protein kinase domain profile. 572 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g1912 Lja-Chr2 19941131 19946366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g1912 10 883 Receptor kinase-like Gene Family AT4G29180 49.776 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lja2g1912 Malectin_like 6e-107 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g1912 - - gmx:100793137 1331.62